Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01363 ATGAAGGACTTGTTAGTGGATTCCCCAGTTTGTGTTCTTGAGGATTTCCTAAGGACCTCAGAATCAGAATCAAGCACTTATTCTTCCAAAGAGCACACTTTGGATTCTGAGTCTCATCAAGATAAGCCTAAACATGTTTCTAAGTGGCACACTTTTGTGCAATTGCTGAGAAGCAAGTCAAAGAAGCCTTTGGCCACATTGCATCCTCTTAGTGTTCTCAAGCTCTCAAGAAGAATGAGTGGTAGCATGAGGGAGACTTCACATGCTACCATGGATTCTCATTCCTCATTATTGCATACTTCACCCTGGAAGATCTTCACTCACCGTGACTTACAAATTGCTACTAAATATTTCAGCCAAGAGAATTTGATTGGGAAGGGTGGTTATGCTGAGGTTTACAAAGGGTGTTTGCCAAATCATCAGTTAGTAGCAGTTAAAAGACTAACAAGAGGAACAGCTGATGAAACTATAGGCGACTTCTTATCAGAACTTGGAATCATGGCGCATGTAAGCCACACCAACACTGCTAAATTGGTTGGTTATGGTGTGGAAGGTGGAATGCATCTGGTTCTTGAATTGTCTGAAAAAGGAAGCCTAGCTTCAGTTCTTTATGGGTCCAAGGAGAAGCTTCCCTGGTCTATTAGGCAGAGAATTGCATTAGGAACAGCAGAGGGAATATTGTATCTTCATGAAGGTTGTCAAAGAAGAATTATCCATAGAGATATAAAAGCTGCAAATATCTTACTCACTGATGACTTTGAGCCTCAGATTTGTGATTTTGGGCTGGCAAAATGGCTACCAGAGAATTGGACTCACCACAGTGTTACAAGATTTGAAGGAACATTTGGATATCTTGCTCCAGAATACTTACTCCATGGCATAGTGGACGAGAAAACAGATGTATTTGCCTTTGGTGTTGTGCTATTAGAATTAGTAACTGGCCGGAGAGCGCTTGATTACTCGCAACAAAGTCTTGTCCTATGGGCAAAACCTTTGCTGAAGAAGAATAAAATTAGGGAGCTGATTGATCCTTCACTAGGAGGTGATGACTTTGATTATAGGCAGATTAATGTTATGCTCTTGGCAGCTTCTTTATGCATACAACAATCTTCAATTCGTCGTCCCTCTATGAGACAGATTGTGCAGCTTCTGAAAGGGAATCTTAGCTGCATCAAGTTTGCAAAGAAATCTCGAGTTCCATTCTTCACAAGAGTCTTTCAAGACGAGTTTCTTGACTCTGATTAG 1245 0.4096 MKDLLVDSPVCVLEDFLRTSESESSTYSSKEHTLDSESHQDKPKHVSKWHTFVQLLRSKSKKPLATLHPLSVLKLSRRMSGSMRETSHATMDSHSSLLHTSPWKIFTHRDLQIATKYFSQENLIGKGGYAEVYKGCLPNHQLVAVKRLTRGTADETIGDFLSELGIMAHVSHTNTAKLVGYGVEGGMHLVLELSEKGSLASVLYGSKEKLPWSIRQRIALGTAEGILYLHEGCQRRIIHRDIKAANILLTDDFEPQICDFGLAKWLPENWTHHSVTRFEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDYSQQSLVLWAKPLLKKNKIRELIDPSLGGDDFDYRQINVMLLAASLCIQQSSIRRPSMRQIVQLLKGNLSCIKFAKKSRVPFFTRVFQDEFLDSD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01363 414 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 398 - -
Arst6g01363 414 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Arst6g01363 414 Gene3D Phosphorylase Kinase; domain 1 77 192 - -
Arst6g01363 414 Pfam Protein kinase domain 119 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01363 414 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 87 192 - -
Arst6g01363 414 SMART serkin_6 118 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01363 414 Gene3D Transferase(Phosphotransferase) domain 1 195 398 - -
Arst6g01363 414 PANTHER OS08G0249100 PROTEIN 7 403 IPR046958 -
Arst6g01363 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Arst6g01363 414 SUPERFAMILY Protein kinase-like (PK-like) 92 384 IPR011009 -
Arst6g01363 414 ProSiteProfiles Protein kinase domain profile. 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01363 Arst-Chr6 12836893 12839157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01363 105 380 Trihelix Transcription Factor Family AT1G68690 43.206 5.73e-67 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Arst6g01363 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01363 - - gmx:100780587 631.328