Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01288 ATGTACCAATATGGTGAGTGCTGGGAACAAGATCAGAGTAGTTATGAGCCCTATTATGATGAGGTTGTTCCTGCTTCTGCTTGGAACTTTGAGCTTCCATTAACAACAGGAACAGTTGTTGATGCAGTTGAGTCTTCTAGTATTAGCAGTAGTAGTGCAGATAGCTATTCCTCTTATGAAAGATGCAACACTATTCCTTCTTCATACTCTGATCTTGCTGCTGCTAATGATGTGCTAATCTTCCATCAACACTATCCACAACAACATCATGTTCATGATGATCATGAATATGATGCTACAGATCATCATGAGAAGCCTCTTCAGATTTGCTTTCAAACAAATCAGACAGAAAAGCAAGGCTATGTGAGTGGTTCTAGCAACTGTGGTTATAGGAGAGGTCCATCATCATCATCGTCATCATCGATTAAAAGAAGAATAAGATGGACCAAAGATCTGCATGAGCCATTCATGACCGTTGTTAATAGACTCGGTGGTCCGCATAAGGCAAAGCCTAAGGCTATATTAGACATGATGAAATCTGATTTGTTGTCAATTACACACATTAAAAGTCACTTGCAGAAATATAGGTCTACAATATGGCACCACAAAGCTTCACATGAAAGATCATTTGAGGAAGGAGATAAAACAGATGTCACTCATCAACTTCAACACAAAATACAAATACAAATTGAGGAATCACAACAACTTCAACAAGAGGTCCGCAGGAGTATTCATCAACAACTGGAGATGCAACGAACTTTGCAAATGCTGATTGAACAGCAAAGAGAGCAGCTCAAGATGATGTTAGATCAACAAAAAGAAAGAAACAAAGTGGGAAAGAAATTAAATAACCCTTAA 858 0.3834 MYQYGECWEQDQSSYEPYYDEVVPASAWNFELPLTTGTVVDAVESSSISSSSADSYSSYERCNTIPSSYSDLAAANDVLIFHQHYPQQHHVHDDHEYDATDHHEKPLQICFQTNQTEKQGYVSGSSNCGYRRGPSSSSSSSIKRRIRWTKDLHEPFMTVVNRLGGPHKAKPKAILDMMKSDLLSITHIKSHLQKYRSTIWHHKASHERSFEEGDKTDVTHQLQHKIQIQIEESQQLQQEVRRSIHQQLEMQRTLQMLIEQQREQLKMMLDQQKERNKVGKKLNNP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01288 285 Gene3D - 142 199 - -
Arst6g01288 285 MobiDBLite consensus disorder prediction 122 143 - -
Arst6g01288 285 Coils Coil 255 275 - -
Arst6g01288 285 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 120 276 IPR044848 GO:0003700
Arst6g01288 285 SUPERFAMILY Homeodomain-like 142 198 IPR009057 -
Arst6g01288 285 Coils Coil 219 239 - -
Arst6g01288 285 Pfam Myb-like DNA-binding domain 147 196 IPR001005 -
Arst6g01288 285 NCBIfam myb-like DNA-binding domain, SHAQKYF class 143 197 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01288 Arst-Chr6 12098634 12101107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01288 135 272 G2-like Transcription Factor Family AT4G28610 44.286 2.05e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst6g01288 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01288 - - aip:107647908 508.834