Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01287 ATGTACCAATATGGTGAGTGCTGGGAACAAGATCAGAGTAGTTATGAGCCCTATTATGATGAGGTTGTTCCTGCTTCTGCTTGGAACTTTGAGCTTCCATTAACAACAGGAACAGTTGTTGATGCAGTTGAGTCTTCTAGTATTAGCAGTAGTAGTGCAGATAGCTATTCCTCTTATGAAAGATGCAACACTATTCCTTCTTCATACTCTGATCTTGCTGCTGCTAATGATGTGCTAATCTTCCATCAACACTATCCACAACAACATCATGTTCATGATGATCATGAATATGATGCTACAGATCATCATGAGAAGCCTCTTCAGATTTGCTTTCAAACAAATCAGACAGAAAAGCAAGGCTATGTGAGTGGTTCTAGCAACTGTGGTTATAGGAGAGGTCCATCATCATCATCGTCATCATCGATTAAAAGAAGAATAAGATGGACCAAAGATCTGCATGAGCCATTCATGACCGTTGTTAATAGACTCGGTGGTCCGCATAAGGCAAAGCCTAAGGCTATATTAGACATGATGAAATCTGATTTGTTGTCAATTACACACATTAAAAGTCACTTGCAGAAATATAGGTCTACAATATGGCACCACAAAGCTTCACATGAAAGATCATTTGAGGAAGGAGATAAAACAGATGTCACTCATCAACTTCAACACAAAATCAGACAAATACAAATTGAGGAATCACAACAACTTCAACAAGAGGTCCGCAGGAGTATTCATCAACAACTGGAGATGCAACGAACTTTGCAAATGCTGATTGAACAGCAAAGAGAGCAGCTCAAGATGATGTTAGATCAACAAAAAGAAAGAAACAAAGTGGGAAAGAAATTAAATAACCCTTAA 861 0.3844 MYQYGECWEQDQSSYEPYYDEVVPASAWNFELPLTTGTVVDAVESSSISSSSADSYSSYERCNTIPSSYSDLAAANDVLIFHQHYPQQHHVHDDHEYDATDHHEKPLQICFQTNQTEKQGYVSGSSNCGYRRGPSSSSSSSIKRRIRWTKDLHEPFMTVVNRLGGPHKAKPKAILDMMKSDLLSITHIKSHLQKYRSTIWHHKASHERSFEEGDKTDVTHQLQHKIRQIQIEESQQLQQEVRRSIHQQLEMQRTLQMLIEQQREQLKMMLDQQKERNKVGKKLNNP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01287 286 Coils Coil 256 276 - -
Arst6g01287 286 Gene3D - 142 199 - -
Arst6g01287 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 119 277 IPR044848 GO:0003700
Arst6g01287 286 MobiDBLite consensus disorder prediction 122 143 - -
Arst6g01287 286 Pfam Myb-like DNA-binding domain 147 196 IPR001005 -
Arst6g01287 286 NCBIfam myb-like DNA-binding domain, SHAQKYF class 143 197 IPR006447 GO:0003677
Arst6g01287 286 SUPERFAMILY Homeodomain-like 142 198 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01287 Arst-Chr6 12098631 12101107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01287 135 273 G2-like Transcription Factor Family AT4G28610 42.857 1.36e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst6g01287 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01287 - - aip:107647908 513.072