Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01280 ATGTCCCATTTCCGGAAACTCCAATTAACATACTTCATCTCCAAAATATCCCACACTTGCCTTAAACCCTCGCAAAGTCCTAGATTCCACAGCGCCAAATCTGCTCCCCAATCCGCACTAAAAAACTGTGATTTCAAGTTCCCCTCGAAGGTCAGAAAGGAAGCACAAGTCGCATTGCTCGAGTACCTTCACTCCACAAGGAGCTTGCAGTTCCTTGATGCAGACAACATGTGCAAAAACTCGCCCTTTTTCCTCAACGATATTCTGAGCAAGGTTCTTCAGAAGAAGAAGATCGACACTGCTGCCAGTGACGTCAAGAAATCAATCTCGCGTTACCTCCGTTACCACCCAATTAACGAGTTCGAACCATTCTTCGAGAGTACAGGTTTGAAGCCTTTTGAATACTTGCACCTTCTTCCAAGGAACATGATGTTCATCAACGATGACACTGTGTTGATGGAGAATTATCATACTCTGTGTAACTATGGTGTTCCCAGGAACAAAATGGGAAAGATCTTCAAGGATGCACCTCAAGTTTTTCGATATGAAAGTGGGGTACTGGTGTCCAAGTTTCAGAGTTATGAAGAGCTTGGTGTGGCTTCTTCAACTTTGGTAAAGGTGATTTCTTTGAGCCCTAGAATTTTGGTTGGAGATGTTGACCTTTATCTTGTGAAGGTTTTGGAGAAATTGAATCGTCTTGTTGGTGAAGAAAAGGGTAGTACTTGGATTGAGGAGCAGTTGTTGGATGAGAGTAGTTGTAATTTTGGGGTTATGCATGAGCTCTTGTGCTTGCTTGAGAAAGTTTACAGTGACAAAAAGTTGTTGGGTGAGATGATTGGCCAGCACCCTTTTGTTTGTTTTGAGGATTCTGGAGTTTGGGCATTGTCCCTCATTGTGTTCTTGGTGAAATTAGGGTTGTCCTTGGACCAAATAGCTATAATTTTTGTCAAGTTTCCGCAAATTGGGGTGTTGATGTTTCTGTCGAATTTGCGCAAATGTTTTACGTTCCTGTCTGATATCGATATGCATGCTGCGGAGATTGGGAATATTTTCCAGTCTCATTCCTTGCTGATGGGTTCATTCACTATTAAGAAATCTAGTAGTTTGCTCAGTAGCTTGAATGTTGGCAAGAAAAGGGTCTGTAAGTTAGTGCAGGATAATCCGGAAGGGATGCAGAATTGGGCTGTGGGGAGGAAAATTCAGCCTTACCCTGAGGATAAGGAAATGAGGGCTCTGAAAACAGAGTTCTTGAAAACAAAGTTCTTGTTGAGCCTTGGATACGAAGAGAACTCGGAGGGAATAAAACAGGCTTTTAAGCTGTTTAGAGGTAAGGGAGATGAGCTTCAGGAGAGATACGATTTTATTGTTAATGCTGGCTTGGACGCTAAGGATGTTCACGAAATGATTAAGGCTTCACCTCAGATTCTTAATCAGACCACAGATATGATCAACACGAAAATTGAGTATCTTGTGAATGAAGGATATCCTATATCAAGTTTAGTCGATTTCCCATCTTTTCTTTCCTATACACTTTGTAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTGAGAGACCATAGAGTTGTTCACCCCAGGCTTGCTTTGAGCACCATAGTTGCATGCTCAGAGGAGTTATTCTTACGGTTGTATGTAAATCGGCATCCATCTGGCCTTCAAGTTTGGCAGGATTTGAAGTCCGAAATTTATCCTGAGAATAATAACATGATATGA 1734 0.417 MSHFRKLQLTYFISKISHTCLKPSQSPRFHSAKSAPQSALKNCDFKFPSKVRKEAQVALLEYLHSTRSLQFLDADNMCKNSPFFLNDILSKVLQKKKIDTAASDVKKSISRYLRYHPINEFEPFFESTGLKPFEYLHLLPRNMMFINDDTVLMENYHTLCNYGVPRNKMGKIFKDAPQVFRYESGVLVSKFQSYEELGVASSTLVKVISLSPRILVGDVDLYLVKVLEKLNRLVGEEKGSTWIEEQLLDESSCNFGVMHELLCLLEKVYSDKKLLGEMIGQHPFVCFEDSGVWALSLIVFLVKLGLSLDQIAIIFVKFPQIGVLMFLSNLRKCFTFLSDIDMHAAEIGNIFQSHSLLMGSFTIKKSSSLLSSLNVGKKRVCKLVQDNPEGMQNWAVGRKIQPYPEDKEMRALKTEFLKTKFLLSLGYEENSEGIKQAFKLFRGKGDELQERYDFIVNAGLDAKDVHEMIKASPQILNQTTDMINTKIEYLVNEGYPISSLVDFPSFLSYTLCRVKLRLSMYNWLRDHRVVHPRLALSTIVACSEELFLRLYVNRHPSGLQVWQDLKSEIYPENNNMI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01280 577 PANTHER CGI-12 PROTEIN-RELATED 295 555 IPR003690 GO:0003690|GO:0006355
Arst6g01280 577 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Arst6g01280 577 SMART mt_12 170 200 IPR003690 GO:0003690|GO:0006355
Arst6g01280 577 SMART mt_12 466 496 IPR003690 GO:0003690|GO:0006355
Arst6g01280 577 Gene3D Transcription termination factor 3, mitochondrial 292 565 IPR038538 -
Arst6g01280 577 Gene3D Transcription termination factor 3, mitochondrial 84 290 IPR038538 -
Arst6g01280 577 FunFam Transcription termination factor MTEF18, mitochondrial 297 565 - -
Arst6g01280 577 Pfam mTERF 413 547 IPR003690 GO:0003690|GO:0006355
Arst6g01280 577 Pfam mTERF 264 401 IPR003690 GO:0003690|GO:0006355
Arst6g01280 577 Pfam mTERF 159 388 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01280 Arst-Chr6 12078615 12083068 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst6g01280 mTERF 5.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01280 - - lja:Lj1g3v4317450.1 637.106