Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01277 ATGATTTGCGACTACCTCTACGTGCAACTCAACCTCGTTGTCTTCTCGTCGATTTTGATTTCTCAGGGTTTGGCATCTACTCCTTCACCCGAAGTATCAGCTCTGCAGGATCTATACAAGGCTTTAAACTACCCTCCTCAGCTCCAAGGTTGGAATGGTAGTGATCCATGCGAGGAGTCTTGGAAAGGAATCGCTTGTTCCGGGTCATCAGTTATACACATAAAAATTCGCGGACTGAACCTCACTGGAAATTTTGGAAGCATGCTCCGTGATCTTCAGAACTTGAAGGAACTTGATGTCAGTTCTAATAACATAGGTGGAGAAATACCATTTAGCTTACCCCGCAATGCAAGAAATATGAATTTAAGCCACAATCTCTTAAATGGACCCATTGGCGATGTATTTACTGGCCTGGATGATCTCAAAGAAATGGACCTTTCATACAACAATTTCTCAGGAGATCTTCCAAGATCGTTTGGTTCCTTGAAAAACCTTGATAAATTGTTTCTGCAGAATAACAGATTTACTGGATCAGTCACCTACCTGGCTGAACTTCCACTTTCATATCTGAACATCCAAGACAATCTGTTTAGTGGCATTCTTCCACTCCACTTTCACACCATACCGAATTTACGGATTGGAGGGAATAACTTCCATTCAGAGGACAGCTCTCCTCCCTGGTCTTTTCCTCTGGACACTGTACCAATAGCAGTTGAACGTAACTTTAGTCACCCACCCTCACACCCAGTTGAACATAACTTTAGTCACCCACCCATACACCCAGTTGAGCATAATACAACTGTGGCAAGTGCCATAAGGAACTATGCTCCTCCACCTCCCAAGGTTAGTCAGCACAAGGAAAAACATATGGGTCCCGGAGGAATAGCTTTTATGGTTGGTGCAGGAACACTAATGGCAACTGGTGTGGCACTCTTCGTTGCAATCCGTTTAAGTAAAAGGCGAGCACAGATGCCAAGCTCAAAGAGCTTGGAAAGCAACCATTTCTCTTTACATTCTCATCCAAGCAGTGCAACAATAGAGGTCTCATCTACTGCTTTAGATGAGAGCCCACAAATCCCGGCTTTTGATCCTGCATCCCTCAGGGGTCCAATGGGATTGCCTCCTGTGCACCACAACAACATAGACGAAGCTTCAAGAAGAAGTTTTTCTAGAAGAAGCAGATCCACCGGAAGGACGAAAGTTTACACCGTATCGGAGCTTCAGTTTGCTACTAACAACTTCAATGAATGCAACATTCTGGGAGAGGGTTCTCTTGGCACTGTATACAGAGCCAAATTTCCTGATGGCAAAATTCTGGCAGTGAAGAGCATAAACTTGGCGGGTGTGTCTTACAGAGAAGAGGAAAAGTTCTTGGATGTTATCTGCACGGCTTCCCGATTGAAGCACCCCAACATAGTAGCACTGAATGGCTACTGTTTGGAGCGGGGAAAGCATCTTCTTGTGTATGATTATGTTAGGAATTTGACTCTGCATGATGCTCTTCACAAAGACGTATACAAGCCTCTATCATGGATCCTCCGTCTCCGGATAGCTGTCGGCGTTGCTAACGCCCTGGACTACTTGCACTCAGCATTCTCCCCACCTGTTGCCCATGGAAACTTGAAGGCTGCCAATGTTCTTCTGGACGAGAATTTGATGCCTCGTCTTTCTGACTGTGGCTTGGCTGCTTTGAGACCACTGAGGAGCATTCAGGCTACCGAGGCTCCTATTGATGTAGGTTACCTGTCACCTGACCATGGCAGAGCAGGAGGTAGCAGCAGAAAGAGAGATGTGTATGCCTTTGGGGTACTGCTTCTGGAAATGTTAACGGGAAGAAAAGCATTCGATGGTGGCAGGCCAATTGAGGAGCAGTACCTAGTGAAGTGGGCTTCACCCAGGCTTCACGATAACGCCAGTTTGGAGCAGATGGTGGATCCCGGTATGAAGAGGACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGCTATCGTCTCGCTCTGCATACAGCCTTCGAGGCATTTTCGTCCTCAGATGTCAGAAGTTGTGGACTCGCTTGTATCATTCTCGCAAAAGTTCAACATAGCAAAGGGCGGTGGTAGAGTAGGAGCAGATGGTGGCAACTTCATTGAACTTGAATCATTTGAGAAATCTTTCCGTTCAACAAACTCACGATTTATGGGTTCACCGGCGTTGAGCCATGTATCCGCCTAA 2211 0.4604 MICDYLYVQLNLVVFSSILISQGLASTPSPEVSALQDLYKALNYPPQLQGWNGSDPCEESWKGIACSGSSVIHIKIRGLNLTGNFGSMLRDLQNLKELDVSSNNIGGEIPFSLPRNARNMNLSHNLLNGPIGDVFTGLDDLKEMDLSYNNFSGDLPRSFGSLKNLDKLFLQNNRFTGSVTYLAELPLSYLNIQDNLFSGILPLHFHTIPNLRIGGNNFHSEDSSPPWSFPLDTVPIAVERNFSHPPSHPVEHNFSHPPIHPVEHNTTVASAIRNYAPPPPKVSQHKEKHMGPGGIAFMVGAGTLMATGVALFVAIRLSKRRAQMPSSKSLESNHFSLHSHPSSATIEVSSTALDESPQIPAFDPASLRGPMGLPPVHHNNIDEASRRSFSRRSRSTGRTKVYTVSELQFATNNFNECNILGEGSLGTVYRAKFPDGKILAVKSINLAGVSYREEEKFLDVICTASRLKHPNIVALNGYCLERGKHLLVYDYVRNLTLHDALHKDVYKPLSWILRLRIAVGVANALDYLHSAFSPPVAHGNLKAANVLLDENLMPRLSDCGLAALRPLRSIQATEAPIDVGYLSPDHGRAGGSSRKRDVYAFGVLLLEMLTGRKAFDGGRPIEEQYLVKWASPRLHDNASLEQMVDPGMKRTFSSKALSRYAAIVSLCIQPSRHFRPQMSEVVDSLVSFSQKFNIAKGGGRVGADGGNFIELESFEKSFRSTNSRFMGSPALSHVSA 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01277 736 FunFam Leucine-rich repeat receptor-like protein kinase 492 696 - -
Arst6g01277 736 Gene3D Transferase(Phosphotransferase) domain 1 493 697 - -
Arst6g01277 736 ProSiteProfiles Protein kinase domain profile. 414 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01277 736 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
Arst6g01277 736 SUPERFAMILY Protein kinase-like (PK-like) 389 685 IPR011009 -
Arst6g01277 736 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 379 491 - -
Arst6g01277 736 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 119 - -
Arst6g01277 736 Gene3D Ribonuclease Inhibitor 28 236 IPR032675 -
Arst6g01277 736 SUPERFAMILY L domain-like 31 212 - -
Arst6g01277 736 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 120 229 - -
Arst6g01277 736 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Arst6g01277 736 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 688 IPR046959 -
Arst6g01277 736 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Arst6g01277 736 Pfam Protein tyrosine and serine/threonine kinase 418 685 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01277 Arst-Chr6 12062112 12066547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01277 10 736 Strubbelig Receptor Gene Family AT5G06820 48.819 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Arst6g01277 PK_Tyr_Ser-Thr 2.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01277 - - gmx:100775254 950.273