Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01272 ATGAGTCTCCAAACCAATTTCTTATCTATTTTGGTTCTCTTGGCTGCAGTTTTTGCATCTTTGCATCTCATAAATCCAAATGAACAGTTTCTCAACATTTTCAAAGACTTCACTATAACACCCTTCTCATCATCATCATATTCATATGCATGTTTGCAACTACCTTATATATGCATCTTCTTCAGAGGCCATCATCATAATCATCATCATAACAAGAAACACCCTGATGATGATGATAGTGGAAATACTGGTTCCATTTGTGATGATTTTCCACCAGGGATTCCACCTCCAAGCACCAACACCACTTCTTATCTATGTGTTGATCAAAAAGGTTGCTGCAATTTCACAACAGTACAAGCAGCAGTTAATGCAGTTCCAGATTTAAGCCAAAAAAGAACCATAATTTGGATTAACAAGGGCATATACTATGAGAAAGTAATGGTCCCAAGAACCAAAGCCAACATAACATTTCAAGGACAAGGTTACACTTCAACCGCAATTGCATGGAATGACACGGCAAAGTCAGCAAATGGCACATTCTATAGTGGTTCCGTACAAGTTTTTGCATCCAACTTCATTGCCAAGAACATAAGCTTCATGAACTTGGCACCAATGCCAAGTCCTGGGGTTGAAGGAGCACAAGCAGTAGCAATCAGAATATCAGGAGATCAAGCTGAATTCAAGGGTTGTGGATTCTTTGGAGCACAAGACACCCTTCATGATGATAAGGGTCGCCATTACTTCAGGGATTGCTATATCCAAGGCTCAATTGATTTCATATTTGGCGATGGAAGGTCCTTTTACGAGAATTGTGAAATAGTTTCTATAGCGAATCCAGTGCCACAAGGATACAGGAGCATAAATGGTGCAGTGACAGCTCATGGAAGAGTATCCATGGATGATAACACAGGATTTGTGTTTGTGAACAGCACAATAGGAGGGAGTGGGAGAATATGGTTAGGAAGGGCATGGAGACCATACTCACGTGTTGTTTTTGTGTCAACAACAATGTCAGATATCATTGCCCCTGAAGGTTGGAACGATTTCAATGACCCTTCAAGGGATCAGACCATATTCTATGGAGAGTACAATTGCTCTGGTCCCGGAGCTAGCATGGCAATGAGGGCACCATATGTGCAGAGATTAAACGATACACAAGCTCTTCCATTCCTCAACATAACTTTTATTGATGGTGACCAATGGTTGGAAAATTACACACAATTAATAACCTAA 1233 0.4047 MSLQTNFLSILVLLAAVFASLHLINPNEQFLNIFKDFTITPFSSSSYSYACLQLPYICIFFRGHHHNHHHNKKHPDDDDSGNTGSICDDFPPGIPPPSTNTTSYLCVDQKGCCNFTTVQAAVNAVPDLSQKRTIIWINKGIYYEKVMVPRTKANITFQGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNLAPMPSPGVEGAQAVAIRISGDQAEFKGCGFFGAQDTLHDDKGRHYFRDCYIQGSIDFIFGDGRSFYENCEIVSIANPVPQGYRSINGAVTAHGRVSMDDNTGFVFVNSTIGGSGRIWLGRAWRPYSRVVFVSTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCSGPGASMAMRAPYVQRLNDTQALPFLNITFIDGDQWLENYTQLIT 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01272 410 SUPERFAMILY Pectin lyase-like 103 403 IPR011050 -
Arst6g01272 410 ProSitePatterns Pectinesterase signature 2. 253 262 IPR033131 -
Arst6g01272 410 Gene3D - 98 408 IPR012334 -
Arst6g01272 410 MobiDBLite consensus disorder prediction 70 92 - -
Arst6g01272 410 Pfam Pectinesterase 106 399 IPR000070 GO:0030599|GO:0042545
Arst6g01272 410 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 93 403 - -
Arst6g01272 410 FunFam Pectinesterase 99 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01272 Arst-Chr6 12018533 12020325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01272 79 403 Carbohydrate Esterase AT1G05310 71.385 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01272 - - ahf:112696095 828.55