Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01268 ATGGGTTCGAGTGTTAAGAGCAGCAACCAAGGAAGCACTCAACTTGAACCACTTCAACAACAACATCATCATCATCGTCATCATCATCATCATCAAATACAGCAAGAGCACCAAATCTCTTTCGGGATGATGCAATCTCCTTCATCATCATCCTCTATCATCCCGGGAAACTTGTTAAACAAGGATTCAGGTGGTGGTGGAGCTTATGATTTGGGTGAACTGGACCAAGCCCTTTTTCTCTACCTCGATGGACAAGCCGATCCCTCAAATACTCTTCATCAAGACCAAAGACAGAAGTCATCATCATCCGGAATGAGGCCTCATACGCTCAACATTTTCCCCTCTCAGCCTATGCACGTTCACCCATCATCATCCAATTCCAAGGCAAGTATGGAGTTAGTTTCTGCTTCCAAGAACGAACCCGCTTCTGCCACTGCTCCTCCTCCTCAACCACCTACGTAGCAGCGAGACAGTAACCGCAAGGGTCCGACCTCAAGTTCTGAACAAGAAGGACCCAAAACACCAGACCCCAAGACACTGAGACGACTTGCTCAGAATAGAGAGGCAGCTCGCAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAATCCAGTAGGATTAGGCTTAATCAGATTGAGCAAGAGCTACAGCGTGCTAGATCTCAAGGCATATTCTTCGGTGGAAGTGGAGTTATGGGTGGAGAACAAGGTCTTGGTGTGGGTATTAATGGCATAAGCACAGAGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCTAGAGGAGCACCACCGCCTAGTGTGCGAGCTGAGGGCGGCGGTGCAAGAACACCTACCTGAGAACGAGCTCAGACTCTTTGTGGACAATTGCTTGGCGCATTACGACCAAGTTATGAACCTCAAGGGTTTAGTGGCCAGATCCGACGTCTTCCACCTTGTTTCCGGCATGTGGAAGACGCCGGCTGAGCGTTGCTTTATGTGGATCGGTGGATTCAGGCCCTCAGAACTCATTAAGATTATGGTGAGTCAAATAGAGCCTCTGACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCAACACAAGAGGCAGAAGAGGCTCTTTCCCAAGGCCTTGAGGCTCTCAATCAATCTCTCCTGAACACTATCACATCAGATTCTTTGAGCTCTCCTCCTGTTATGGCTACCTACATGGGACAGATGGCTCTCGCCATGAACAAGCTCGCTACTCTTGAAGATTTCGTCAAACAGGCAGATAATCTACGGCAGCAAACGGTGCACCGGCTGCATGAGATCCTAACGACGCGGCAGGCAGCGAGGTGTTTTCTGGCGATAGCGGAGTACTTCCATCGCCTGAGAGCCCTCAGTTCTCTCTGGTTGTCCCGCCCTCGCCAGGATCAGTAG 1413 0.4933 MGSSVKSSNQGSTQLEPLQQQHHHHRHHHHHQIQQEHQISFGMMQSPSSSSSIIPGNLLNKDSGGGGAYDLGELDQALFLYLDGQADPSNTLHQDQRQKSSSSGMRPHTLNIFPSQPMHVHPSSSNSKASMELVSASKNEPASATAPPPQPPTCXQRDSNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQIEQELQRARSQGIFFGGSGVMGGEQGLGVGINGISTEAAMFDVEYARWLEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKGLVARSDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIMVSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLLNTITSDSLSSPPVMATYMGQMALAMNKLATLEDFVKQADNLRQQTVHRLHEILTTRQAARCFLAIAEYFHRLRALSSLWLSRPRQDQ 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01268 471 Gene3D - 178 226 - -
Arst6g01268 471 CDD bZIP_HBP1b-like 179 231 - -
Arst6g01268 471 Pfam bZIP transcription factor 179 207 IPR004827 GO:0003700|GO:0006355
Arst6g01268 471 Coils Coil 198 225 - -
Arst6g01268 471 MobiDBLite consensus disorder prediction 87 143 - -
Arst6g01268 471 Pfam Seed dormancy control 270 344 IPR025422 GO:0006351|GO:0043565
Arst6g01268 471 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 221 IPR004827 GO:0003700|GO:0006355
Arst6g01268 471 PANTHER TRANSCRIPTION FACTOR TGA9 110 469 - -
Arst6g01268 471 MobiDBLite consensus disorder prediction 86 196 - -
Arst6g01268 471 SMART brlzneu 175 261 IPR004827 GO:0003700|GO:0006355
Arst6g01268 471 ProSiteProfiles DOG1 domain profile. 252 466 IPR025422 GO:0006351|GO:0043565
Arst6g01268 471 MobiDBLite consensus disorder prediction 1 70 - -
Arst6g01268 471 MobiDBLite consensus disorder prediction 36 58 - -
Arst6g01268 471 MobiDBLite consensus disorder prediction 155 174 - -
Arst6g01268 471 MobiDBLite consensus disorder prediction 1 18 - -
Arst6g01268 471 SUPERFAMILY Leucine zipper domain 179 221 IPR046347 GO:0003700|GO:0006355
Arst6g01268 471 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Arst6g01268 471 MobiDBLite consensus disorder prediction 175 191 - -
Arst6g01268 471 FunFam BZIP family transcription factor 178 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01268 Arst-Chr6 11959655 11965038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01268 56 470 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 61.693 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst6g01268 DOG1 5.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01268 K14431 - gmx:100815176 658.677