Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01250 ATGAGTGTTTGCTCTTCATCAATGAGCTTATACTCAATAAATGCTGTTATGCTCAAAGGCCATGCTCATCAGATTCTTATGAGTAGCAGCATCTGTGGAGTTAGGCCTCAAGAAACAGGAACATCAAATTCATGTTCCTTCAGCTTGTCCCCTGAGAAATCACAGATAAACCATGCAGCTGCTCAGTCTATTTCCACAACAACATTGTCTAGTTCCACTGCCATGGGGAAACATAATCATTATGTGATTTCATTGGCATGCCAAAGTATGAACATGAGGCTTTTGGTATCTAAACCAAAAGCACTACTCCCTAAAGTTAAGAGTACTATGGGATCTATGACTTGGCCAAGTGGCTTTCTTCTTGAATTTCTTATATGCAATTCAAATTCTAAACCTACAAATTCTGATGAGTGCAATGAGTCAACTATCAAATTCTCACATGGCAAGAAAGTTTACACAGATTATTATGTTATAGGAATACCTGGAGATGGAAGGTGTCTGTTTCGTTCTGTTGCTCATGGAGCTTGTTTGAGATCTGGAAAACTGGCTTCCAGTGAAAGACTGGAGAGACAGCTAGCAGATGAGTTGCGGGGTCAGGTTGCTGATGAGTTTATCAAAAGAAGGGAAGAGACAGAATGGTTTGTAGAAGGAGATTTTGAAACATATGTTTCACAAATAAGGAAGCCTCATGTGTGGGGTGGTGAGCCTGAATTATTCATTGCTTCTCATGTTTTGCAGGTGCCAATCACAGTGTACATGTATGATGAGGATGCAGGTGGATTGATAACAATTGCCGAGTATGGACAAGAATATGGCAAGGAAAATCCAATTACAGTTCTTTACCATGGCTATGGTCATTATGACGCATTGGAAATTCCTACAACAAAGGGTCATAGACCAAGATTCTAG 909 0.4004 MSVCSSSMSLYSINAVMLKGHAHQILMSSSICGVRPQETGTSNSCSFSLSPEKSQINHAAAQSISTTTLSSSTAMGKHNHYVISLACQSMNMRLLVSKPKALLPKVKSTMGSMTWPSGFLLEFLICNSNSKPTNSDECNESTIKFSHGKKVYTDYYVIGIPGDGRCLFRSVAHGACLRSGKLASSERLERQLADELRGQVADEFIKRREETEWFVEGDFETYVSQIRKPHVWGGEPELFIASHVLQVPITVYMYDEDAGGLITIAEYGQEYGKENPITVLYHGYGHYDALEIPTTKGHRPRF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01250 302 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 44 292 - -
Arst6g01250 302 Pfam OTU-like cysteine protease 161 287 IPR003323 -
Arst6g01250 302 FunFam OTU domain-containing protein 139 297 - -
Arst6g01250 302 Gene3D - 136 298 - -
Arst6g01250 302 ProSiteProfiles OTU domain profile. 155 293 IPR003323 -
Arst6g01250 302 CDD OTU_plant_OTU4-like 154 290 - -
Arst6g01250 302 SUPERFAMILY Cysteine proteinases 154 290 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01250 Arst-Chr6 11753533 11755288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01250 - - aip:107645443 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01250 6 11753533 11755288 Arst6g01250 6 11753533 11755288 ECH
Arst6g01250 6 11753533 11755288 Arst6g03795 6 106212636 106215402 PCT