Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01249 ATGAAAGCAAATTTTTTAATAACAACTATTGTGAAAGAAATCAAAGATCCAGTTTTGAACATTCTCCAACACTATTTTGAATTTGCATCACTTGAGACATTGTCTGACAGAGTGGGTCAAAGACAAATTTTAACAGATGTCATTGGAAAACTGCATGCAATAGGAGAAGAAGAACAAGTAGATGTTAAAGGAAAACCCACAAAAATACGACGAATGGAATTGATACTCAAAGAGAACATCGTGTTGAAAGTCACGTTGTGGAGAAATCTCTCAAGTCAGATAAATAAAGAAATTACAATACAAATCAAGGGCCAAAAAATAGTTGCACTCACATCAACATTGGTTAGTGAATACAAAGGTCATTATTCGGTTAGCACAACTTCAAGTACAAAAATCTATATCAATCCAGAAACTGAAGAATTCGCACAGCTGACTTATGGGACTAATCAACATGAAGAAGTAGTGGAGATACCAAGCCAAGACAATGTCAACACAAATCTTCAGAGCAGAATGATTAGAAATCGAATAACTATTCAAGATCTAATGGCTATCCAATGGGAATCTGATGATCAGGAAAAGATCTTCACAATTTTAGCAACTATAAACGGAATTGATGACAAATTTGGATGGAACTATGTTGAATGTGAAAAGTGTCATAAGAAAGCATATAAAAAAGGAGACAACTACATCTGTGGCACATGTAATCAAACACCACAATATCCAACCATAAGGTTCAGAATTCAATTAAATGTTTCAGATCAAAGTGCTACAGCAACTTTTGTATTATTTGATGGCGAAGCAAAAAAATTGTTGGGCACAACTGCTTCAAATCTAATCACACTCCAGAAAAGTAATGATCTTGAAGCACCACCCCAATTGAAAAACTTGTGCAACCTCACACTTATTTTTGAAGTCAAACTAAATGAGTTTAATCTCAAAGAAGGTTCTCAACAATACACGGTTACCAAGACATTTGTTCCAACTAAAAACACTGAACAGCAACACCCATTACAACAAATAAAACAGTATACTTTATTAACAAAACAAACAACTTAA 1056 0.3381 MKANFLITTIVKEIKDPVLNILQHYFEFASLETLSDRVGQRQILTDVIGKLHAIGEEEQVDVKGKPTKIRRMELILKENIVLKVTLWRNLSSQINKEITIQIKGQKIVALTSTLVSEYKGHYSVSTTSSTKIYINPETEEFAQLTYGTNQHEEVVEIPSQDNVNTNLQSRMIRNRITIQDLMAIQWESDDQEKIFTILATINGIDDKFGWNYVECEKCHKKAYKKGDNYICGTCNQTPQYPTIRFRIQLNVSDQSATATFVLFDGEAKKLLGTTASNLITLQKSNDLEAPPQLKNLCNLTLIFEVKLNEFNLKEGSQQYTVTKTFVPTKNTEQQHPLQQIKQYTLLTKQTT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01249 351 Pfam Replication protein A OB domain 43 135 IPR031657 -
Arst6g01249 351 SUPERFAMILY Nucleic acid-binding proteins 173 343 IPR012340 -
Arst6g01249 351 CDD RPA1_DBD_C 178 342 IPR047192 -
Arst6g01249 351 Gene3D - 20 156 IPR012340 -
Arst6g01249 351 SUPERFAMILY Nucleic acid-binding proteins 26 145 IPR012340 -
Arst6g01249 351 PANTHER OS03G0429900 PROTEIN 62 348 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst6g01249 351 Pfam Replication factor-A C terminal domain 195 323 IPR013955 -
Arst6g01249 351 CDD RPA1_DBD_B_like 46 142 - -
Arst6g01249 351 Gene3D - 159 344 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01249 Arst-Chr6 11751021 11753300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01249 26 289 Core DNA Replication Machinery Family AT5G08020 27.660 3.33e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01249 - - adu:107492778 697.582