Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01235 ATGGAGCAAGCCACAGGAGTGCTGCGTGGATCCACTCACGACGACGTCGTATTAGAGTCAATTCAATTCAACGAAGAAATCCGGGGAATCATGGCGCCCGCGCCAGCGCCGGAAAACGCCAGCTCATTCACCGCGCTGCTCGAGCTACCGCCGACGCAGGCCGTTGAGCTCCTCCATTCTCCTGATTGCCCGGCCGCCGATCGGGAACCGCCGTGCCATGTTAGCACCAACCAAAAACCCTACCTTCTTTGCTCCTACGGCGGCAATTTGACCTTCCCTTCCAACGCCGCGCTGATAGAACGCGCCGCCAAGTTCTCAGTCTTCGCTGGCGAGAACTCGCCGCCGGAGGATGCGGCGCGCCTGGCTCCAGTAGCTGTATCCGGCGTGGTGAAGAATGAGCCGCAGGAAACCGACTCGAACCCCAGCTCCACGCAGGGTTGCGTTTCGGATCCCGCTGTTGATACCAAGAATCAGAAGACCGCGAAGAGGAAGGAGCGAGAGAAGAAGGTAACGCTAAGTTCCCCCAATTTTGCAGCCACTTCGGGTGAAAAGCTTCCATATGTTCACGTTCGAGTTCGTCGAGGTCAAGCCACGGATAGCCATAGCTTAGCAGAAAGGGCAAGGAGAGAGAAGATAAACGCTCGGATGAAGCTTTTGCAGGAGCTGGTCCCCGGTTGCAACAAGATATCAGGAACGGCCTTGGTTCTGGATGAAATTATCAACCACGTGCAATCTCTACAGCGTCAAGTGGAGTTCTTATCAATGAAATTAGCAGCCGTTAATCCAAGAATTGATTTCAGCCTGGATAGCTTGCTGGCTACTGATGGGTCATCTGTAATGGACAGCAACTTAACTAGCATGGCTTCACCTGTTATGTGGCCAGAAAACCTAGCCAATGGTAACAGACAGCATTTTCAACAACATTGGCAATTTGATGCATTCCACCAACCACTTTGGGGGAGGGAAGAAGCCAACCATAATTTCATGACTCCAGAACACTCACTTCTGAGTTATGACTCGTCTGCTAATTCAGCATCTCTGCAGTCAAATCAATTGAAGATGGAGCTCTGA 1071 0.5238 MEQATGVLRGSTHDDVVLESIQFNEEIRGIMAPAPAPENASSFTALLELPPTQAVELLHSPDCPAADREPPCHVSTNQKPYLLCSYGGNLTFPSNAALIERAAKFSVFAGENSPPEDAARLAPVAVSGVVKNEPQETDSNPSSTQGCVSDPAVDTKNQKTAKRKEREKKVTLSSXPNFAATSGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIDFSLDSLLATDGSSVMDSNLTSMASPVMWPENLANGNRQHFQQHWQFDAFHQPLWGREEANHNFMTPEHSLLSYDSSANSASLQSNQLKMEL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01235 357 Gene3D - 194 266 IPR036638 GO:0046983
Arst6g01235 357 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 131 341 IPR024097 GO:0006355
Arst6g01235 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 247 IPR011598 GO:0046983
Arst6g01235 357 SMART finulus 203 253 IPR011598 GO:0046983
Arst6g01235 357 FunFam transcription factor bHLH48-like isoform X1 194 266 - -
Arst6g01235 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 266 IPR036638 GO:0046983
Arst6g01235 357 MobiDBLite consensus disorder prediction 129 169 - -
Arst6g01235 357 CDD bHLH_AtBPE_like 187 272 - -
Arst6g01235 357 MobiDBLite consensus disorder prediction 132 155 - -
Arst6g01235 357 Pfam Helix-loop-helix DNA-binding domain 201 248 IPR011598 GO:0046983
Arst6g01235 357 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01235 Arst-Chr6 11631280 11636470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01235 10 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 50.133 1.61e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst6g01235 HLH 1.3e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01235 - - gmx:100814124 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01235 6 11631280 11636470 Arst6g01235 6 11631280 11636470 ECH