Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01213 ATGCTTGAACAGAATTCTCACCTTAGGTCACCACTATTGTTATGTGTATCCATCTGCTTCTTGCTATATCCTGTTGTGAGGGCTGACATACCAGTAGGTTCTAAGCTTTGTGTGGTTGACAATGGCAGCTGGGTTTCCAAAAATGGTAATTTTGCAGTCGGGTTCTTTAACATTTCGGATGAACCTAACCAGTTTAGTATTGGTATTCGATTCAACAACAAGTCTATACCGTACAGCCAACAAACAATGGTGTGGACTGCTGGATTTCAGACTGCAGTAGGTAACAAGTCTTGTTTCCAAATCACCACAAATGGAGATATGATCCTGTTTGATGATCAAGGAATGATAGCATGGAACAGCAACACCAGTAACAAGGGTGTCGTGTCGGCTTCTCTTCTTGATAATGGTAATCTTGTTCTGATGGACAGAGAGCAAAAGATAATTTGGCAAAGTTTTGATGATCCAGATGATACACTTCTCCCAGGACAGTATCTATCTTGTGATAAATCGCTTCGTGCTGCCACAATGCTTCGCTGGGAAAGTAATATTCCCTACTGGATAAGCGAAAGCCCCTCCACTTCGAATCTCACTGCATATCTGACAAACAATGGAGCTCTACAACTTTTAGACAACAGTTCTAATGTTGTTTGGAGTGTGTTTGGGGAAGACCACAATGAATCTGTGAACTACCGATTTCTTAGGATAGATGTCGATGGCAATCTCCGCCTATATTCATGGGTGGAGGCTTCACAGTCATGGAGATCTGTCTGGCAAGCTGTTGAGAATCAGTGCAAGGTTTTTGCAACTTGTGGTAAACAAGGGGTCTGTGTTTTGTCTCCCTCAGGTACTGCTGATTGTGTGTGCCCTTTCGAGCAGACTGACACCGGGACCTGTTTGGTTCCATATGAACAGAAGTGTGAACCTGGCTCCACTATGATGACATATTGGAACACACACCTATATGGAATTTACCCTGTTGATGGTCCGGGTATCATAAGTAGCCTGCATCAATGTATGCAATTGTGCCAGAATGATTCAAGGTGTACGGTCGCAACCTTTTCTAATGATGGTGTTCCCCAATGCTCAATAAAGAAATCTGAATATGTCACTGGTTATTCAGATCCGTCTCTAAGCTCGGTATCATTTGTTAAGAGATGTTCATTTCCATTTGCAGTAAATCCCACACTTGGAAGCACACCTCCAACCAAACAAGCTCCTAGATTTTGTGTTCCTTGTTTAGTAGGAGCAGCCTCAGGCACATGTTTCGTTGTTGTTATCATTCAGCTTGGAATTGTTTTCTACATCTATAGAAGAAAAATTTCTACTAGGAGGAAAGAAAGTTTAGCTTCCGCAGGTGCAAATTCAAAGGGCTTAGTTGCATTATCTTTTTCAGAGATCAAGAGCCTCACCGAAGACTTCAAGGATCAGATTGGACCAAATATGTTCAAGGGCATGCTACCAAACAAATCTCTTGTTGCAGTTAAAGAGCTGAATGCACCCATAGATGACAGGAAGTTTCGGAGTGCTGTTCTGAAGATTGGAAGCATCCACCACAGGAATCTTGTGAAGCTGGAGGGCTATTGTTGTGAGTTCAATCATAGATTCTTAGTCTACGAGTACGTCAAAAACGGTTCTCTTGAGAACTATATAGACGATTCCCCTCTTTGCAAGAAACTGACTTGGAGAAAGAGAGTTGACATCTGCTCACGTGTGGCCAAGGCCATCAATTATCTTCACTCTGAATGCAGGGAGTTTATAAGTCATGGAAATCTGAAGTGTGAAAATGTCATGTTGGATGAGAACTTAGAAGCCAAGGTGAGTGAATTTGGGTTCGCAATAGTAGACGGCGAGGCTGTGTACTCTGGCTTTTCGGCCGAGAGGGACATAGCAGATTTTGGCATGTTAGTCCTAACCTTGTTGACCGGATGTAGAGATCAGACAGAACTTTGTGAGTGGTCATATAAAGAATGGATAGAAGGGAATGCTGCAAATGTCATTGATAAAAGAATTGAAGGTGGTGCCAACTCAAATGAACTTGAACGGGTGTTGAGAATTGCATTCTGGTGCTTACAAAGCGATGAACGTCAAAGACCCTCAATGTTGGAGGTAGTGAGAGTATTAGATGGAACATTGAGTGTTGATCCAGCACCACCTCCATTTTCTGGCCACAGACCATTGCTGGAAGAATCTGAGACACAAGAAGATGATGTTTCAGAATCTGACATTCAGTAG 2232 0.4256 MLEQNSHLRSPLLLCVSICFLLYPVVRADIPVGSKLCVVDNGSWVSKNGNFAVGFFNISDEPNQFSIGIRFNNKSIPYSQQTMVWTAGFQTAVGNKSCFQITTNGDMILFDDQGMIAWNSNTSNKGVVSASLLDNGNLVLMDREQKIIWQSFDDPDDTLLPGQYLSCDKSLRAATXMLRWESNIPYWISESPSTSNLTAYLTNNGALQLLDNSSNVVWSVFGEDHNESVNYRFLRIDVDGNLRLYSWVEASQSWRSVWQAVENQCKVFATCGKQGVCVLSPSGTADCVCPFEQTDTGTCLVPYEQKCEPGSTMMTYWNTHLYGIYPVDGPGIISSLHQCMQLCQNDSRCTVATFSNDGVPQCSIKKSEYVTGYSDPSLSSVSFVKRCSFPFAVNPTLGSTPPTKQAPRFCVPCLVGAASGTCFVVVIIQLGIVFYIYRRKISTRRKESLASAGANSKGLVALSFSEIKSLTEDFKDQIGPNMFKGMLPNKSLVAVKELNAPIDDRKFRSAVLKIGSIHHRNLVKLEGYCCEFNHRFLVYEYVKNGSLENYIDDSPLCKKLTWRKRVDICSRVAKAINYLHSECREFISHGNLKCENVMLDENLEAKVSEFGFAIVDGEAVYSGFSAERDIADFGMLVLTLLTGCRDQTELCEWSYKEWIEGNAANVIDKRIEGGANSNELERVLRIAFWCLQSDERQRPSMLEVVRVLDGTLSVDPAPPPFSGHRPLLEESETQEDDVSESDIQ 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01213 744 Gene3D - 29 153 IPR036426 -
Arst6g01213 744 Gene3D Hepatocyte Growth Factor 321 389 - -
Arst6g01213 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 154 - -
Arst6g01213 744 CDD B_lectin 45 155 IPR001480 -
Arst6g01213 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 621 716 - -
Arst6g01213 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 542 620 - -
Arst6g01213 744 Gene3D Phosphorylase Kinase; domain 1 436 541 - -
Arst6g01213 744 PIRSF SRK 222 619 IPR024171 GO:0004674
Arst6g01213 744 PIRSF SRK 618 744 IPR024171 GO:0004674
Arst6g01213 744 PIRSF SRK 183 226 IPR024171 GO:0004674
Arst6g01213 744 PIRSF SRK 4 186 IPR024171 GO:0004674
Arst6g01213 744 ProSiteProfiles Protein kinase domain profile. 446 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01213 744 Gene3D Transferase(Phosphotransferase) domain 1 619 717 - -
Arst6g01213 744 Gene3D Transferase(Phosphotransferase) domain 1 542 618 - -
Arst6g01213 744 SUPERFAMILY Protein kinase-like (PK-like) 483 708 IPR011009 -
Arst6g01213 744 PANTHER OS07G0415500 PROTEIN 12 721 - -
Arst6g01213 744 Pfam D-mannose binding lectin 82 180 IPR001480 -
Arst6g01213 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 438 541 - -
Arst6g01213 744 MobiDBLite consensus disorder prediction 715 744 - -
Arst6g01213 744 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 182 IPR036426 -
Arst6g01213 744 Gene3D - 154 261 IPR036426 -
Arst6g01213 744 ProSiteProfiles Bulb-type lectin domain profile. 36 153 IPR001480 -
Arst6g01213 744 SMART blect_4 35 155 IPR001480 -
Arst6g01213 744 Pfam Protein tyrosine and serine/threonine kinase 489 613 IPR001245 GO:0004672|GO:0006468
Arst6g01213 744 SUPERFAMILY alpha-D-mannose-specific plant lectins 180 256 IPR036426 -
Arst6g01213 744 Pfam PAN domain 333 376 IPR003609 -
Arst6g01213 744 ProSiteProfiles PAN/Apple domain profile. 307 387 IPR003609 -
Arst6g01213 744 Pfam S-locus glycoprotein domain 213 292 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01213 Arst-Chr6 11226796 11230579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01213 354 718 Receptor kinase-like Gene Family AT4G05200 25.943 4.84e-41 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Arst6g01213 PK_Tyr_Ser-Thr 1.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01213 - - gmx:100809478 1048.11