Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01196 ATGGTTTCAACTTGTGGCATCTCTTTCCAAATCTCCACATTAAAGAAAAAGGGAAGGTACATTGTGAAGGAAAGTTGCAATTTTTGTTGTTGTTGTTGTGGCAGAGCATTGATCACAGTTTTGGGGTTTATTTTTGGAAGAACGCTGTTGAGAATGTGGGGGGTGAAAGCTCTAAAAGCACTTCACTTCAGCAGAGAACAGTGTTCGGTGATGGAAATTCTGTGCTTCTTGCATCTTCTGCTAGGTTGGTATCTCTCAAACTCTAACCTTGTTAATGCTCAGCTACAAGACCAAGCTATATTACTTGCCATCAACAAAGAGCTTGGAGTTCCTGGCTGGGATTCCAGCAACTCAAACTACTGTAATTGGCAAGGAATAAGCTGTGGTAATCATTCATTGGTGGAGAAGCTTGATCTTGCTCACCGGAACCTTCGAGGTAATGTTACTTTGCTGTCTGAGCTCAAAGCATTGAAGTGGCTTGACTTGTCAAATAATAACTTTGATGGATTGATTCCTCCTGCTTTTGGAAAGTTATCTGATCTTGAAGTCCTAGATTTGTCTTCAAATAAGTTTTCAGGTTCAATTCCGCCGCAATTGGGTGCTCTCAAAAGCCTCAGATCATTGAACCTTTCTAGTAATGTGCTTGTTGGAGAGATACCAATAGAGCTTCATGGCTTAGAGAATTTGCAGGATCTTCAAATTTCTAGTAATCATTTGAGTGGTTTAATACCTTCTTGGGTGGGCAATTTGACCAACCTGAGGGTTTTTTCTGCTTATGAGAATCGTTTAGGTGGCAAGGTTCCGGATAATTTAGGCTCGATTCCGGATCTTCAAATACTTAACCTGCACTCAAATCAGCTTGAAGGCCCTATACCGGCAAGCATTTTTGTCCCAGGGAAGCTACAAGTTCTGGTTCTCACCCAGAATAATTTTAGTGGTGATCTTCCTCAGGAAATTGGGAATTGCCATGCCCTTTCCAGTGTTCGAATCGGAAACAACCATCTAGTAGGTAATATTCCAAAGACAGTTGGAAATCTTAGTAGCCTAACCTACTTTGAGGCCGACAATAATAATCTTTCCGGTGAAGTAGTGTCTGAATTTGCTCAGTGTTTGAATCTTACCCTCTTGAATTTAGCTTCAAATGGATTTATGGGAGCAATTCCGGCAGAATTTGGAAAACTTATGAACCTTCAGGAATTAATTCTTTCTGGAAATAGCCTGTTTGGAGATATCCCAAGGTCGATTCTGAGTTGCAAAAGTCTTAACAAGCTTGATATTAGCAACAACAGATTCAATGGGACAATTCCAAGTGAAATCTGCAACATTTCTAGGTTGCAGTACTTGCTCTTGGGTCAGAATTCCATAAGAGGAGAGATCCCTCATGAAATTGGAAATTGTGCGAAACTTCTTGAACTACAATTGGGCAGCAACTATTTGACTGGAACTATCCCTCCTGAAGTTGGCCACATTAGAAACTTACAGATAGCACTAAATCTGAGCTTCAATCATCTTCATGGACCACTGCCCCCTGAATTAGGAAGACTGGACAAACTTGTTTCCCTCGATGTCTCAAACAACAGGCTCTCGGGTAATATACCACCTGAGCTTAAGGGAATGTTGAGCTTGATAGAGGTCAACTTCTCCAACAATCTTTTTGGAGGCCCTGTACCAGAATTTGTACCATTTCAGAAGAGTCCTATTTCAAGTTTCATCGGCAATAAAGGGCTTTGCGGAGAGCCACTGAACTCTTCATGCGGAGATCTTTATGATGATCACAAGGCCTACCATCACAGGGTTTCTTACAGAATCATACTGGCTGTAATTGGTTCTGGTTTAGCAGTTTTTATGTCGGTAACTATAGTTGTGTTGCTTTTTATGATCAGAGAGAGGCAAGAAAAAGTAGCCAAAGATGCTGCCGGGATCATAGACGATGGAACCACTGAAAAACCAACTATAATAGCTGGGAGCATTTTTGTTGATCATCTCAAACAAGCAGTAGACCTTGATGCTGTTGTTAAAGCGACTCTGAAAGACTCTAATAAGCTCAGTAGTGGAACTTTCAGCACTGTTTACAAGGCCGTCATGCCTTCTGGAGTGGTCTTATCTGTAAGGAGACTGAAGTCCGTCGACAAGACAATAATGAACCACCAGAACAAGATGATTAGAGAACTCGAAAGGCTGAGCAAAGTTTGTCACGATAATCTAGTGCGACCGGTTGGCTATGTTATATATGAAGATGTTGCTCTTCTCTTGCATAATTATTTTCCAAATGGTACACTGGCTCAGCTTCTTCATGAATCTTCGAGGCAACCAGAATATCAGCCTGATTGGCCTTCTAGGCTATCCATTGCCATTGGAGTCGCAGAAGGTTTGGCTTTTCTTCATCATGTAGCAATTATCCATCTTGACATTTCTTCTGGCAATGTACTTCTAGATGCAAATTTCAAGCCATTGCTTGGTGAGATTGAGATTTCTAAACTCCTTGATCCAACCAAGGGCACGGCAAGTATTAGTGCAGTTGCTGGTTCCTTCGGTTACATACCACCAGAATATGCTTATACAATGCAAGTTACAGCACCGGGAAATGTTTATAGCTATGGCGTTGTTCTGTTGGAAATCCTTACTACTCGACTGCCAGTGGATGAGGATTTCGGTGAAGGTGTAGATTTGGTGAAGTGGGTTCAAAGTGCTCCGGTAAGAGGGGAAACTCCAGAGCAGATACTGGATGCAAGGCTCAGCACTGTTTCCTTTGGTTGGAGGAAAGAAATGCTTGCTGCTCTTAAGGTTGCGTTGCTCTGCACGGACACCACGCCGGCAAAGCGACCAAAAATGAAGAATGTGGTTGAAATGCTCCGAGAGATAAAGCAAAACTGA 2874 0.4203 MVSTCGISFQISTLKKKGRYIVKESCNFCCCCCGRALITVLGFIFGRTLLRMWGVKALKALHFSREQCSVMEILCFLHLLLGWYLSNSNLVNAQLQDQAILLAINKELGVPGWDSSNSNYCNWQGISCGNHSLVEKLDLAHRNLRGNVTLLSELKALKWLDLSNNNFDGLIPPAFGKLSDLEVLDLSSNKFSGSIPPQLGALKSLRSLNLSSNVLVGEIPIELHGLENLQDLQISSNHLSGLIPSWVGNLTNLRVFSAYENRLGGKVPDNLGSIPDLQILNLHSNQLEGPIPASIFVPGKLQVLVLTQNNFSGDLPQEIGNCHALSSVRIGNNHLVGNIPKTVGNLSSLTYFEADNNNLSGEVVSEFAQCLNLTLLNLASNGFMGAIPAEFGKLMNLQELILSGNSLFGDIPRSILSCKSLNKLDISNNRFNGTIPSEICNISRLQYLLLGQNSIRGEIPHEIGNCAKLLELQLGSNYLTGTIPPEVGHIRNLQIALNLSFNHLHGPLPPELGRLDKLVSLDVSNNRLSGNIPPELKGMLSLIEVNFSNNLFGGPVPEFVPFQKSPISSFIGNKGLCGEPLNSSCGDLYDDHKAYHHRVSYRIILAVIGSGLAVFMSVTIVVLLFMIRERQEKVAKDAAGIIDDGTTEKPTIIAGSIFVDHLKQAVDLDAVVKATLKDSNKLSSGTFSTVYKAVMPSGVVLSVRRLKSVDKTIMNHQNKMIRELERLSKVCHDNLVRPVGYVIYEDVALLLHNYFPNGTLAQLLHESSRQPEYQPDWPSRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVDEDFGEGVDLVKWVQSAPVRGETPEQILDARLSTVSFGWRKEMLAALKVALLCTDTTPAKRPKMKNVVEMLREIKQN 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01196 957 Pfam Leucine rich repeat N-terminal domain 101 128 IPR013210 -
Arst6g01196 957 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 125 295 - -
Arst6g01196 957 CDD STKc_IRAK 682 954 - -
Arst6g01196 957 ProSiteProfiles Protein kinase domain profile. 676 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g01196 957 Pfam Leucine rich repeat 228 287 IPR001611 GO:0005515
Arst6g01196 957 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Arst6g01196 957 Gene3D Ribonuclease Inhibitor 95 197 IPR032675 -
Arst6g01196 957 Pfam Protein tyrosine and serine/threonine kinase 679 951 IPR001245 GO:0004672|GO:0006468
Arst6g01196 957 Gene3D Phosphorylase Kinase; domain 1 646 754 - -
Arst6g01196 957 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 296 588 - -
Arst6g01196 957 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 325 952 - -
Arst6g01196 957 ProSitePatterns Tyrosine protein kinases specific active-site signature. 799 811 IPR008266 GO:0004672|GO:0006468
Arst6g01196 957 SMART LRR_typ_2 154 177 IPR003591 -
Arst6g01196 957 SMART LRR_typ_2 274 298 IPR003591 -
Arst6g01196 957 SMART LRR_typ_2 394 418 IPR003591 -
Arst6g01196 957 SMART LRR_typ_2 226 249 IPR003591 -
Arst6g01196 957 SMART LRR_typ_2 178 202 IPR003591 -
Arst6g01196 957 SMART LRR_typ_2 442 466 IPR003591 -
Arst6g01196 957 SMART LRR_typ_2 515 538 IPR003591 -
Arst6g01196 957 SUPERFAMILY L domain-like 268 581 - -
Arst6g01196 957 Gene3D Ribonuclease Inhibitor 298 587 IPR032675 -
Arst6g01196 957 Pfam Leucine Rich Repeat 396 418 IPR001611 GO:0005515
Arst6g01196 957 SUPERFAMILY L domain-like 111 362 - -
Arst6g01196 957 SUPERFAMILY Protein kinase-like (PK-like) 676 954 IPR011009 -
Arst6g01196 957 Gene3D Ribonuclease Inhibitor 198 297 IPR032675 -
Arst6g01196 957 Gene3D Transferase(Phosphotransferase) domain 1 755 957 - -
Arst6g01196 957 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 755 957 - -
Arst6g01196 957 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 646 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01196 Arst-Chr6 11057516 11061539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01196 71 956 Receptor kinase-like Gene Family AT2G41820 71.171 0.0 1289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst6g01196 PK_Tyr_Ser-Thr 1.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01196 - - adu:107492611 1892.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01196 6 11057516 11061539 Arst6g01196 6 11057516 11061539 ECH