Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01169 ATGGGAACTGCCTCCAGGCAGTTGAAGGTTATGCTCCGCAAGAACTGGCTCCTCAAAATTCGTCACCCTTTCGTTACTGCAGCTGAGATATTGCTCCCTACGGTTGTGTTGTTGCTGTTAGTGGCTGTGAGGACTCAAGTTGACACACAAATTCATCCAGCTGAACCGCACATTCAGAAAGAGATGTTTGTGGAGGTGGGTAAAGGTATATCCCCTAACTTCCAACAAGTTTTGGCATCCTTGTTGGAGGAAGGGGAGTATTTAGCTTTTGCACCAGATACCGATGAGACGAAGCTGATGATAGATGTAGTGTCCATAAAATTCCCACTCCTGAAGCTTGTTAGTCAAGTGTACAAAGATGAGGTAGAGTTGGAAAGCTACATTCGCTCAGATGCTTATGGTACCTGCAGTCAAGCAAGGAATTGTTCAAATCCGAAAATTAAAGGAGCTGTTGTATTTTATGAACAAGGTCCTCAGTCGTTTGATTATAGCATACGCCTCAATCATACATGGGCATTCTCCGGTTTCCCAGATGTAAAAACAATAATGGACACAAATGGCCCATTTCTTAACGACTTGGAACTGGGTGTTAGTGCTGTACCAACAATGCAGTACAGCTTCAGTGGGTTTTTTACTCTCCAGCAAATGGTCGATTCATTTATAATATTCATTGCTCAACAGTCTGGCATAAATTCCAGCACTGAACGCATAACCCTTCCTCTATCAGGCTTCTATGACACTGATTTCTCTCTGAATGCTACATGGAATCAGTTTAACCCCAGTCATATACGAGTATCTCCATTTCCCACTCGAGAGTACACTGATGATCAGTTCCAGTCAATCATAAAGAAAGTCATGGGAATATTATACCTATTGGGTTTTCTCTATCCAGTTTCGCGCCTCATCAGTTATTCTGTTTTTGAGAAGGAACAGAAGATTAAAGAAGGACTCTATATGATGGGCCTGAAAGATGGGATATTTCATCTCTCTTGGTTTATCACATATGCTTTGCAGTTTGCAGTGTCTTCCGGGATCATTACTGCTTGCACCATGGATAATTTATTCAAGTATAGTGATAAGACATTGGTGTTTGCCTACTTTTTCATTTTTGGGCTTAGTGCAATCATGCTGTCATTTTTTATATCAACATTTTTCAAACGGGCCAAAACAGCTGTTGCAGTTGGAACGCTGTCTTTTCTTGGTACTTTTTTCCCTTATTACACTGTCAATGATGAGGGTGTTTCAATGGTATTGAAGGTTCTTGCTTCTATACTTTCACCTACAGCCTTTGCTCTGGGGTCAGTTAACTTTGCTGATTATGAGCGTGCTCATGTGGGACTGCGTTGGACCAACATATGGCGGGAATCATCTGGAGTGAATTTTTCTCTATGTCTTTTGATGATGATACTTGATACACTGCTATATTGTGCAATGGGTCTATATTTTGACAAGGTTCTTCCACGGGAGTATGGACGGCGATATCCGTGGTCTTTTGTTTTCCGAAGAGACTTCTGGAGAAAGAATAAAACTGGAAAACACCGCCCCTCCAATTTTGAAGTTAAAATTGATGGTAGGAATTCCGAGTCGAGACCTTCTATGGAAGCAATAAGCCTAGATATGAAACAACAGGAGCTTGATGGCAGATGCATTCAGATAAGGAATTTGCATAAAGTGTATGCTACTAGAAAAGGAGATTGCTGTGCTGTTAACTCCTTACAACTTACATTGTATGAACATCAGATTCTTGCTCTTCTAGGACATAATGGAGCTGGTAAAAGTACAACAATCTCGATGCTTGTTGGTCTTCTTCCTCCTACATCAGGGGATGCTTTGGTGTTTGGAAAGAACATTGTATCAGATATTGATGAGATACGGAAGGTTTTGGGTGTGTGCCCACAACATGGATATTACACTTCATCGCAGCTTGTAAGGGAGCATTTAGAAATATTCGCCATATTAAAGGGTGTTGATGAAGACTCACTGGAGGCTGTTGTTACCAATATGGCTGACGAGGTGGGCCTGGCTGATAAAATTAACAGTGTTGTGAGAGCTCTTTCTGGTGGCATGAAGAGAAAATTGTCTCTTGGAATTGCATTGATAGGGAACAGTAAGGTTATAATTCTTGATGAACCTACCAGCGGAATGGATCCATACTCAATGCGTTTGACTTGGCAGTTAATAAAAAAATTTAAGAAGGGCAGGATAATCTTACTAACAACTCATTCAATGGATGAAGCAGATGAACTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCACTTTTCTTGAAGCATCATTATGGAGTTGGTTATACTCTAACACTTGTAAAGTCAGCTCCTACTGCTTCTATAGCTAGTGATATAGTATATCGTCATGTTCCCTCAGCAACCTGTGTAAGCGAGGTGGGAACTGAGATTTCCTTTAGGCTTCCGCTGGCATCTTCATCAGCTTTTGAGGGGATGTTTAGGGAAATTGAAGGTTGCATGAAAAAACCACTTTTGAACATGGAAATAAGTGGTAGTGGTAATGAAGACAGTCTTGGTATTGAAAGCTATGGTATATCAGTCACAACCCTAGAGGAGGTATTTTTGAGAGTTGCAGGATGTGACTATGATGGAGTCGAATGCTTCGAGGGAAATGATCGTTCCCTTGTGTCTGACTCTGTGGCTTTGCTTGGTTCTTATGACCATCCCTCCACCAAAAAATGTTTTTTAGGAAATTATAAGAAGTTCCTTGGTTTGATATCTAGCATAGTGGCAGGAGCTTGTGGTTTGATTTTTGCTATGGTTATAAGTTTCATAAACTTCGTGGGTATGCTGTGTTGTAGCTGTTGTCTCATTTCTAGGTCAACATTCTGGCAACACTCGAGAGCTTTATTCATTAAAAGGGCAATATCTGCTCGGAGAGATCACAAAACAATTATATTCCCTAACCTGATCCTTTCAACTTCTTATTTTAATCCTCTGTTGACTGGTGGGGGTGGGGGAGGTCCAATCCCTTTTAATCTATCTTTGCCTATTGCTGAAAAGGTAGCACAAAATGTCAAAGGAGGGTGGATTCAAAGATACAAGCCAAGCTCATACAAGTTCCCTAATTCAGGGAAGGCATTAGCTGATGCAGTGGAAGCAGCAGGGCCAACTCTAGGACCTGCTCTACTTTCAATGAGTGAATATTTGATGTCTAGCTTCAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAAAATAGTGATGGGAGCTTAGGCTACACTGTATTGCACAATTGTTCTTGCCAGCACGCTGCTCCCACCTTTATCAATGTTATGAACAGTGCCATTCTTAGACTTGCTACTGGTGACACAAATATGACAATTCAGACACGCAACCACCCACTACCAATGACACAAAGCCAGCTCGTACAACGTCATGACCTGGATGCCTTCTCTGCTGCAATTATTGTCAATATTGCGTTCTCTTTCATACCCGCCTCATTTGCTGTTCCCATTGTTAAGGAACGTGAAGTGAAAGCTAAGCACCAGCAGCTAATTAGTGGGGTTTCTGTCCTTTCATATTGGGCTTCTACATATATTTGGGACTTCGTGAGCTTCTTGTTTCCGGCCTCATTTGCCATAATTCTCTTTTACATTTTTGGTTTGGATCAATTTGTTGGAGGGGTATCTTTGTTACCGACTACACTGATGCTTTTGGAATATGGACTTGCAGTTGCATCATCAACTTACTGCCTTACATTTTTCTTTTTTGACCATACCATGGCTCAGAATGTGGTTCTTTTAATTCACTTTTTCACTGGATTGATTCTAATGGTTATCTCATTCATTATGGGACTTATACCAAACACAACAACTGCCAATACTTTTCTTAAGAATTTTTTCAGAATTTCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCATTGGCACTTCTACGGCAAGGAATGAAAGATAAAACAAGTGATGGGATATTTGACTGGAATGTTTCAGGTGCCTCTATTTGTTATCTTGCTATTGAGAGCATTGGTTACTTTTGTTTGACACTTGCACTTGAAGTTTGTCCCTCCCTCAAATTAACTCCGTTTATGATCAAGAAGTGGTGGCAGAGTTTAAACATCTTCCAGCGTAATACCACTTATCTGGAACCTCTCTTAGAACCTTCTATGGAATCTGTTTCAATGGACTTTGATGAAGATGTGGATGTGAAAACCGAAAGAAATAGAGTACTTTCTGGTTCCCTCGATAATTCTATTATCTACCTGCGTAATCTTCGAAAGGTGTATTCTGAAGGGAAGTATCTAGGGGAAAAGGTTGCAGTAGATTCGTTAACCTTTTCGGTTCAGGAAGGAGAATGTTTCGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACAACTCTTTCTATGTTATGCGGGGAAGAATCTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGCTCCCATCCCAAGGCTGCTCGCCAATATATTGGATATTGTCCGCAATTTGATGCTTTATTGGAGTTTTTGACCGTTCAAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGAATACACTATAGATAATGTTGTTAAGGAAAAGATGGTGGAATTTGGCTTATTGAAGCATGCTAATAAACCGTCATTTACTCTTAGTGGGGGGAATAAAAGGAAACTATCTGTTGCAATCGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAACCATCTACAGGTATGGATCCCATCGCCAAAAGATTTATGTGGGATGTAATATCTAGGATCTCAACAAGAAGGGGGAAAACTGCAGTAATTCTAACTACCCACAGCATGAATGAAGCTCAAGCCTTATGTACCAGGATGGGAATAATGGTTGGTGGACGATTAAGATGCATCGGAAGTCCTCAGCATTTAAAAACGAGATTTGGGAATCATCTGGAACTAGAGGTAAAACCTACTGAAGTGAGTTCTGCAGACTTGCAAACACTATGCCAAGCTATTCAGGAAAGAGTTCTCTATGTCCCTTCTCATCCTAGAAGCTTGCTTGGCGACCTTGAAGTTTGCATTGGTGCCACTGACTCCATTACTGCAGAAAATAGTTCCATTGCAGAGATTAGCTTGACACGAGAAATGATAAGCTTAATTGGGCGCTGGCTTGGCAATGAAGAAAGAGTCAAGACACTAATCTCCTGTACACCTGTCTCTGATGGAGCTTCTAGGGAACAATTATCTGAACAATTGTTTCGAGATGGTGGTATTCCATTACCAGTATTTTCCGAGTGGTGGTTGTCGAAACAAAAATTCTCAGAAATTGATTCATTTATACTTTCATCATTTCGGGGAGCAAGATGGCAAGGGTGCAATGGTTTGAACATCAGATACCAGATACCCTATGAAGAAGGTTTATCTCTGGCTGATGTCTTTGGTCACCTTGAAGGAAACAGAGATAGATTAGGGATTGCTGAGTACAGCATCAGCCAGTCAACTCTGGAGACAATATTTAATCATTTTGCAGCTACTTCATGA 5568 0.4084 MGTASRQLKVMLRKNWLLKIRHPFVTAAEILLPTVVLLLLVAVRTQVDTQIHPAEPHIQKEMFVEVGKGISPNFQQVLASLLEEGEYLAFAPDTDETKLMIDVVSIKFPLLKLVSQVYKDEVELESYIRSDAYGTCSQARNCSNPKIKGAVVFYEQGPQSFDYSIRLNHTWAFSGFPDVKTIMDTNGPFLNDLELGVSAVPTMQYSFSGFFTLQQMVDSFIIFIAQQSGINSSTERITLPLSGFYDTDFSLNATWNQFNPSHIRVSPFPTREYTDDQFQSIIKKVMGILYLLGFLYPVSRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAVSSGIITACTMDNLFKYSDKTLVFAYFFIFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGTFFPYYTVNDEGVSMVLKVLASILSPTAFALGSVNFADYERAHVGLRWTNIWRESSGVNFSLCLLMMILDTLLYCAMGLYFDKVLPREYGRRYPWSFVFRRDFWRKNKTGKHRPSNFEVKIDGRNSESRPSMEAISLDMKQQELDGRCIQIRNLHKVYATRKGDCCAVNSLQLTLYEHQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKVLGVCPQHGYYTSSQLVREHLEIFAILKGVDEDSLEAVVTNMADEVGLADKINSVVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKFKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIASDIVYRHVPSATCVSEVGTEISFRLPLASSSAFEGMFREIEGCMKKPLLNMEISGSGNEDSLGIESYGISVTTLEEVFLRVAGCDYDGVECFEGNDRSLVSDSVALLGSYDHPSTKKCFLGNYKKFLGLISSIVAGACGLIFAMVISFINFVGMLCCSCCLISRSTFWQHSRALFIKRAISARRDHKTIIFQXNLILSTSYFNPLLTGGGGGGPIPFNLSLPIAEKVAQNVKGGWIQRYKPSSYKFPNSGKALADAVEAAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNSDGSLGYTVLHNCSCQHAAPTFINVMNSAILRLATGDTNMTIQTRNHPLPMTQSQLVQRHDLDAFSAAIIVNIAFSFIPASFAVPIVKEREVKAKHQQLISGVSVLSYWASTYIWDFVSFLFPASFAIILFYIFGLDQFVGGVSLLPTTLMLLEYGLAVASSTYCLTFFFFDHTMAQNVVLLIHFFTGLILMVISFIMGLIPNTTTANTFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGIFDWNVSGASICYLAIESIGYFCLTLALEVCPSLKLTPFMIKKWWQSLNIFQRNTTYLEPLLEPSMESVSMDFDEDVDVKTERNRVLSGSLDNSIIYLRNLRKVYSEGKYLGEKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARQYIGYCPQFDALLEFLTVQEHLELYARIKGVPEYTIDNVVKEKMVEFGLLKHANKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRMGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSSADLQTLCQAIQERVLYVPSHPRSLLGDLEVCIGATDSITAENSSIAEISLTREMISLIGRWLGNEERVKTLISCTPVSDGASREQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARWQGCNGLNIRYQIPYEEGLSLADVFGHLEGNRDRLGIAEYSISQSTLETIFNHFAATS 1856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01169 1856 Pfam ABC transporter 1450 1592 IPR003439 GO:0005524
Arst6g01169 1856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 788 IPR027417 -
Arst6g01169 1856 Gene3D - 1420 1671 IPR027417 -
Arst6g01169 1856 Gene3D - 537 786 IPR027417 -
Arst6g01169 1856 SMART AAA_5 1458 1645 IPR003593 GO:0016887
Arst6g01169 1856 SMART AAA_5 578 760 IPR003593 GO:0016887
Arst6g01169 1856 Pfam ABC transporter 570 713 IPR003439 GO:0005524
Arst6g01169 1856 CDD ABC_subfamily_A 1428 1654 - -
Arst6g01169 1856 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1428 1666 IPR003439 GO:0005524
Arst6g01169 1856 ProSitePatterns ABC transporters family signature. 1565 1579 IPR017871 GO:0005524|GO:0016887
Arst6g01169 1856 FunFam ATP-binding cassette sub-family A member 12 542 787 - -
Arst6g01169 1856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1424 1660 IPR027417 -
Arst6g01169 1856 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 550 783 IPR003439 GO:0005524
Arst6g01169 1856 CDD ABC_subfamily_A 550 771 - -
Arst6g01169 1856 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1066 1361 IPR026082 GO:0016020|GO:0055085|GO:0140359
Arst6g01169 1856 FunFam ABC transporter A family member 1 1417 1671 - -
Arst6g01169 1856 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1066 1361 IPR026082 GO:0016020|GO:0055085|GO:0140359
Arst6g01169 1856 Pfam ABC-2 family transporter protein 162 480 IPR013525 GO:0016020|GO:0140359
Arst6g01169 1856 Pfam ABC-2 family transporter protein 1079 1358 IPR013525 GO:0016020|GO:0140359
Arst6g01169 1856 ProSitePatterns ABC transporters family signature. 685 699 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01169 Arst-Chr6 10811620 10832874 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01169 525 794 Calmodulin-binding Proteins AT2G36910 25.088 2.45e-16 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01169 K05643 - gmx:100803263 3214.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01169 6 10811620 10832874 Arst6g01169 6 10811620 10832874 ECH