Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01168 ATGGAGGCAACAATATTATGTGACAATAATAATAATAAAGGGTTTCAAGCATAGCAACTTCTCTAGCTTCGTCCGCCAGCTCAATACCTATGGTTTTCGTAAAGTTGCAACAAGCAGATGGGAATTCTCCAATGAGAAGTTCAAGAAAGGTGAAAGAGAAATGCTATGTGAAATTCGAAGAAGAAGAGCATGGACAAGCAAGCAACGGAATGCAGCAGCAAACCAAGGTGCACCCCAAGACTCCGATGAAGATCAAAGGTCTTCATCGACTTCTTCGTCTTCGGGTTACACCACTCTAGTTGATGAGAACAAGCGCCTCAAGAAGGAGAATGGGGTGGTGGCGAAATACTCGCATGCTCAGGAGGAGGAAGAGGACGAGGACGAGAATGAGGCCGAGGCAGAGGCCGGAAAGCCAATGCTGTTTGGAGTAAGATTGGATGTTCAAGGGCAGAGGCAGGTGAAGAGGAAGAGAGACGAGATACGTGAAAGCGCAAGCATTTTGCTCTCTCAATCATGCAAATAG 523 0.4627 MEATILCDNNNNKGLLLECGGGGGRKCNNPPPFLLKTYMLVEDPATDEVVSWNADGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFSNEKFKKGEREMLCEIRRRRAWTSKQRNAAANQGAPQDSDEDQRSSSTSSSSGYTTLVDENKRLKKENGVXVAKYSHAQEEEEDEDENEAEAEAGKPMLFGVRLDVQGQRQVKRKRDEIRESASILLSQSCK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01168 235 Pfam HSF-type DNA-binding 33 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01168 235 Gene3D - 25 123 IPR036388 -
Arst6g01168 235 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01168 235 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01168 235 PRINTS Heat shock factor (HSF) domain signature 33 56 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01168 235 ProSitePatterns HSF-type DNA-binding domain signature. 72 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01168 235 SMART hsfneu3 29 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst6g01168 235 MobiDBLite consensus disorder prediction 128 235 - -
Arst6g01168 235 MobiDBLite consensus disorder prediction 128 161 - -
Arst6g01168 235 FunFam Heat stress transcription factor B-4 25 123 - -
Arst6g01168 235 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 192 IPR027725 -
Arst6g01168 235 MobiDBLite consensus disorder prediction 211 225 - -
Arst6g01168 235 SUPERFAMILY "Winged helix" DNA-binding domain 28 122 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01168 Arst-Chr6 10807462 10810852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01168 30 171 HSF AT2G41690 63.462 9.85e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Arst6g01168 HSF_DNA-bind 4.9e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01168 K09419 - gmx:100802739 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01168 6 10807462 10810852 Arst6g01168 6 10807462 10810852 ECH
Arst6g01168 6 10807462 10810852 Arst6g01168 6 10807462 10810852 PCT