Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01166 ATGTGTACATGCATGTTGCCTGTTATTATGGCTCCAACAACAATGGAGTTGCATGATGGTGGTGCAATCATGGAGAGTGATAATAATATTAGAGAAGTGTGCTTGGTTTGGGAGAATTTGGAAGTGGAAGTAGTAAGCAGTTATAGTAGTGAAAGAAGGAAGAAAGTGTTAAATGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACTTTCCTTGATGCTCTTGCTGGAAGGCTTGGCGGCAATGTTAGAATCACTGGAAATGTAACACTGAATGGGACTAAGACAATTACAAGCTGCAAAAACATTAATTATGTAACTCAAGAAGACTATTTCCTGGGAACTCTAACAGTGAGGGAAACACTAACATATGCTGCTCATCTGAGACTTGCTGCAAACAAGAGCAAAGATGAGATTGACAAGGTTGTAGTCAAGACGCTCGATGAAATGGGTCTTAAAGAATGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAAATCTTAACTCAGCCTCATATACTGTTGCTTGATGAACCTACCAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCACAAGCATAGCACATAATGGAAGAATAGTATTATGCTCCATTCACCAACTTAGCAGTGAAGTCTTCAATCTCTTTGATGATTTGGTGCTCCTTGCAGCAGGTGAAACTGTCTATTTTGGAGAAAGAACTAATGCTATTAAGTTCTTTGCTGATGCAGGGTTTCCTTGTCCAACAAGAAAGAATCCTCCGGAGCACTTCCTTCGATGCGTTAGTCCAGAGTTTGATAATGTTCTAAGTCTAATGCGGTCCAAAAATGTCAATGATACCCCATCATCATGGAATTCTTTAGTGAATATGACTACAGAGGAGACCAAATGGAATCTGATAAACAGTTTCAAGAATTCCATGCATTCAGCAAATGTGAGAGAAAAAATCAGAGAAATCAAACTAAGAAAAGAACCTGTTATTGACAGAGCATATGATACTAGCACATTGAAGCAGCTATGTACTTTGACTCACAGATCATTCCTTAACATGACTAGAGACATCGGTTACTACTGGTTAAGGATCTTGTTCTACATCTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACAAGTAATAATGCAATCTTGCCAAGAAGCAAGTGTGATGGATTCATCTATGGCTTTATGACCTTCCTTTGCATTGGTGGAATGCCCTTCTTCCTTGAGGAGTTAAAGGTGTTCGAAGGCGAAAGGTTCGGGAGGCATTATGGCGAGGCCATTTACGTGTTGTCGAGTTTCATGTCATCACTCCCTTTTGTTGTTGCCATTTCCCTGACTTCAGGAACAATACTTTACCACATGGTGAATTTTCACCCTGGATTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGCTCCATGCTTGTGGTTGCAGCACTAGTCTCCAACCAATTGCTAGCTATTGTAACTGCAGCTGGTGTAACTGTACTCATGTTGATGCCATCAAATGTATCCAGAAGGATAACAGACATTCCTAACTTCTTCTGGCGCTATCCAATGTCCTACATCAGTTATATTGCATGGTCCATAGAGGGTCAATACAAGAATGACTTCGTTGGACTTGAATTTGAACCACTGATACCTGGGGATAGGAAGATAAAAGGTGAGGTGATACTTAAGGAAATACTTGGGATCCAAACAGATTATTCAAAGTGGTGGGATGTTGGAGTTCTGGTTTTGTTGTTAATATCTTATAGAGTGCTCTTTTACTTGGCTCTTAAGCATAGGGAGAGAGCTTCATCAATATTTCGCACCAGAATGAGTGAATGA 1956 0.4034 MCTCMLPVIMAPTTMELHDGGAIMESDNNIREVCLVWENLEVEVVSSYSSERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLGGNVRITGNVTLNGTKTITSCKNINYVTQEDYFLGTLTVRETLTYAAHLRLAANKSKDEIDKVVVKTLDEMGLKECAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLTSIAHNGRIVLCSIHQLSSEVFNLFDDLVLLAAGETVYFGERTNAIKFFADAGFPCPTRKNPPEHFLRCVSPEFDNVLSLMRSKNVNDTPSSWNSLVNMTTEETKWNLINSFKNSMHSANVREKIREIKLRKEPVIDRAYDTSTLKQLCTLTHRSFLNMTRDIGYYWLRILFYILVSVCAGFLYLNVGTSNNAILPRSKCDGFIYGFMTFLCIGGMPFFLEELKVFEGERFGRHYGEAIYVLSSFMSSLPFVVAISLTSGTILYHMVNFHPGFSHYCYFCINLFCSISVTEGSMLVVAALVSNQLLAIVTAAGVTVLMLMPSNVSRRITDIPNFFWRYPMSYISYIAWSIEGQYKNDFVGLEFEPLIPGDRKIKGEVILKEILGIQTDYSKWWDVGVLVLLLISYRVLFYLALKHRERASSIFRTRMSE 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01166 651 Pfam ABC transporter 57 208 IPR003439 GO:0005524
Arst6g01166 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 271 IPR027417 -
Arst6g01166 651 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 40 280 IPR003439 GO:0005524
Arst6g01166 651 SMART AAA_5 66 257 IPR003593 GO:0016887
Arst6g01166 651 Gene3D - 30 274 IPR027417 -
Arst6g01166 651 CDD ABCG_EPDR 35 262 - -
Arst6g01166 651 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524|GO:0016887
Arst6g01166 651 Pfam ABC-2 type transporter 369 577 IPR013525 GO:0016020|GO:0140359
Arst6g01166 651 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 29 647 - -
Arst6g01166 651 Pfam ABC-2 type transporter 237 340 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01166 Arst-Chr6 10748026 10752823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01166 47 249 Calmodulin-binding Proteins AT2G36910 29.680 1.08e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01166 - K05681 aip:107646291 1062.37