Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01165 ATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACTTTCCTTGATGCTCTTGCTGGAAGACTTGCAACCAATGTCAGCATTACTGGAAATGTGCTATTGAATGGCACTAAGAGAACCACATCCTCCAGAGATCTTTCTTATGTAACACAAGAAGACCATTTCTTAGGAACACTAACTGTGAGGGAAACACTCACATATGCTGCTTATCTGAGACTTGCTGCAAACATGACCAATGATGAGATTGACAAGGTTGTAGCCAAGACGCTCGACGAAATGGGTCTTCAAGAATGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAGATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACTAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCAGAAGCATTGCACATGATGGCAGAATTGTTATCTGCTCCATTCACCAACTTAGCAGTGAAGTTTTCAATCTCTTTGATGACATGGTGATCCTCGCAGGAGGTGAAACTGTGTATTTTGGAGAAAGGACTAAAGCTGTTAAGTTCTTTGAAGATGCAGGGTTTCCTTGTCCAACAAGAAAGAACCCTCCTGAGCACTTCCTTCGTTGCATCAGCCCCGAATTCGATAGTGTTCTGACTTTGATACAGTCCAAGAATGCCAATAATGAAGCACCATCATCATGGAATTTTCTAATGAATATGACAACAGAGGAGATTAAATGGAAACTTATAAACTGTTTCAAGAATTCTAGGCAGTTAGCAAATGCAAGGGAAAAGATCAGAGAAATCAAACTAAGAAAAGAACCTCCAATAGAGAGGGCATATGATACTAGAACACTGAAGCAGCTATGCACATTGACTCATAGATCATTCCTTAACATGACCAGAGACATTGGTTACTATTGGTTAAGGATTCTGTTCTACATGTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACTAGTAATAGTGCAATCTTATCAAGAAGCAAGATTGATGGATTCATCTATGGCTTCATGATCTTTCTGTGCATTGGTGGCTTACCCTTCTTCCTTGAGGAGTTAAAGGTCTTCGAGCGCGAAAGATTCGGAAGGCATTATGGAGAGGGAGTTTTTGTTCTTTCGAGTTTCATCTCGTCACTTCCTTTTGTTGTTTTCATTTCCCTGACTTCAGGAACAACACTTTACCACATGGTGAATTTTCACCCTGGTTTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGCTCCATGCTTTTAGTTGCTGCTCTTGTTTCCAACCAGCTCCTAGCTATTGGAACATCAGCTGCTATAACTATACTGATGATGATGCCATCAAATGCATTTCGAAGAATGATTGACATTCCGAAATTCTTCTGGCGCTATCCCATGTCCTACATCAGTTATATCGCGTGGTCAATACAGGTACTAGGGGCAATACAAGAATGA 1539 0.4094 MALIGPSGAGKSTFLDALAGRLATNVSITGNVLLNGTKRTTSSRDLSYVTQEDHFLGTLTVRETLTYAAYLRLAANMTNDEIDKVVAKTLDEMGLQECAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLRSIAHDGRIVICSIHQLSSEVFNLFDDMVILAGGETVYFGERTKAVKFFEDAGFPCPTRKNPPEHFLRCISPEFDSVLTLIQSKNANNEAPSSWNFLMNMTTEEIKWKLINCFKNSRQLANAREKIREIKLRKEPPIERAYDTRTLKQLCTLTHRSFLNMTRDIGYYWLRILFYMLVSVCAGFLYLNVGTSNSAILSRSKIDGFIYGFMIFLCIGGLPFFLEELKVFERERFGRHYGEGVFVLSSFISSLPFVVFISLTSGTTLYHMVNFHPGFSHYCYFCINLFCSISVTEGSMLLVAALVSNQLLAIGTSAAITILMMMPSNAFRRMIDIPKFFWRYPMSYISYIAWSIQVLGAIQE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01165 512 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 211 IPR003439 GO:0005524
Arst6g01165 512 Gene3D - 1 205 IPR027417 -
Arst6g01165 512 Pfam ABC transporter 1 139 IPR003439 GO:0005524
Arst6g01165 512 Pfam ABC-2 type transporter 168 248 IPR043926 GO:0140359
Arst6g01165 512 ProSitePatterns ABC transporters family signature. 111 125 IPR017871 GO:0005524|GO:0016887
Arst6g01165 512 SMART AAA_5 1 188 IPR003593 GO:0016887
Arst6g01165 512 Pfam ABC-2 type transporter 301 508 IPR013525 GO:0016020|GO:0140359
Arst6g01165 512 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 506 - -
Arst6g01165 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 205 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01165 Arst-Chr6 10716735 10720751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01165 1 187 Calmodulin-binding Proteins AT2G36910 29.064 1.16e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01165 - K05681 adu:107492554 1017.3