Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01146 ATGGATCACAGAACAAAGTCGAAGGACTCGCTCAACTACTCTACTCTCTTCAATCTCGAGTCTTTGATGAACTTTCAACTTCCAGAACAAGATGATGATTTCGATTATTACGAAAATAGTAGTCAGGATGAGAGCAGAGATAGCCAAGTAGGTAGGGCTGTTGCAAATTACAGTAATGGGAATATGCGTGGTAAGGAGGTGAGTTCGGCGAAGAAGAGGAAGTGGTCTCAGAACGGGGACAATGAGGAAAGGAGCATATAGGTCGATGCTTGGAGAGCATATTCAGAAATACAAGAGGAGGTTTAATGATAACTCATCTAGTCCTGCTCAAAATCAGGTTGTTGCTCCTCTTCTCAAAAGTAGCGTGGGTTCAAAAGCTCACAAGTCAGGGACTGAACTCAGGAGGGGACTACATGCTGCAGAGACTACATCTGAGTGGATGAATGGTTCCAATTCTCAGAAAATGGGAAATTACCGTGATTCCGATCTCTTGAAGCAATATTGCCCCAATAGGACAATATATGAACCTGCTTTTTTGGATATTGGGGATGGTATCACTTACAAGATTCCTCCAAGATATGATAAGTTAGCTGCATTGCTCAACCTTCCTACCTTCTCAGAGATCCATGTTCAGGATTTCTACTTAAAGGGTACCTTGGATTTGGGATCCTTGGCTGAAATGATGGCTGCTGATAAAAGATTTGGGAACAGAAACCGGATAGGCATGGGGGAAACCATACCCCACTATGAATCACTTCAGGCACGATTGAAGGTCATGTCAGCTTCTAATTCACCTCATAAGTTCAGTCTGAAAGTATCAGACTTGAACTCCTCCATTCCCGAGGGGGCTGCTGGAAACATCAAGCGATCTATTCTGTCCGAGGGTGGTGTATTGCAGATTTACTATGTGAAGGTTTTGGAGAAAGGGGACACTTATGAGATCATTGAACGAAGCCTACCCAAGAAGCAAAAGGTAAAGAAAGACCCTGCTTTGATAGAGAAGGAGGAAATGGAAAGAATTGGTAAGATTTGGGTGAACATTGTTAGAAGAGATATACCCAAGCATCAGAGGAACTTCACTGCTTTGCATCGAAAGCAGCTTGTTGATGCCAAGAGGTTTGCTGAGAACTGTCAGAGAGAGGTTAGGCTGAAAGTGAGTAGATCAATTAAATGGACGCGGACTGCTGGTATACGCACCCGAAAACTTGCTAGAGACATGTTGCTATTCTGGAAGCGAATAGATAAGGAGATGGCAGAAGTACGGAGACGAGAGGAGAAAGAAGCCGCTGAAGCTTTGAGGCGTGAACAGGAGCTTCGTGAAGCAAAGCGGCAGCAGCAAAGGCTGAATTTTCTTATACAGCAAACTGAGCTGTACAGTCACTTTATGCAGAACAAGTCAAGCTTGATATCAGAAGCTTTACCCATGGGTGATGAAAGTACAAATGACCAAGATCTAATTGACTCTTCAACTTTTGGGCGTAATGAGGAGGAAGATCATGAAGAGGCTGAGTTGAAGAAGGAAGCTCTGAAGGCTGCTCAAGAAGCTGTTTCCAAACAGAGAAGATTGACAAGTGCTTTTGACACCGAGTGCTTGAGGCTGCGCCAGGCTGATGAAGCTGATTTACTCCAACCAGCTCTCTCCTCAACCATGCCAGTGGCCTCCACAGTTCGGACACCAGAATTGTTTAAAGGTGTTCTCAAAGAGTATCAGCTAAAAGGTCTTCAATGGCTAGTTAATTGTTATGAGCAGGGTTTAAATGGTATTCTTGCGGACGAGATGGGTCTTGGAAAGACCATTCAGGCTATGGCTTTTTTAGCCCATCTAGCTGAGGAGAAAAACATATGGGGACCTTTCCTGGTTGTTGCACCTGCATCTGTATTAAACAATTGGAATGAGGAACTTGAGCGCTTTTGCCCTGAACTGAAAAGACTTCCTTATTGGGGTGGGGTTGCAGAGCGGTCAGTGCTTAGGAAAAGTATTAACCCAAAGGATCTTTATCGCAGGGAAGCCAAATTTCATGTCCTCATCACAAGCTATCAGTTATTAGTTACTGATGAGAAGTTTTTTCGTCGTGTAAAATGGCAGTACATGGTTTTAGATGAAGCCCAGGCAATTAAAAGTTCTGCCAGTATAAGATGGAAGACGCTCCTAAGTTTTAATTGTCGGAATCGCTTACTGCTGACTGGTACACCTATTCAGAATAATATGGCAGAGTTGTGGTCTCTTTTGCATTTCATTATGCCAACATTATTTGACAGCCATGAGCAGTTTAATGAGTGGTTTTCAAAAGGAATTGAGAACCATGCTGAACATGGGGGTACTTTGAATGAGCACCAACTGAATAGATTGCATTCAATCTTAAAGCCGTTCATGCTGCGCCGTGTTAAAAAAGATGTAATCTCTGAGCTGACCACTAAAACTGAAGTTACAGTTCACTGCAAGTTGAGTTCTCGACAACAGGCTTTCTATCAAGCAATTAAAAACAAGATATCTCTCGCTGAACTGTTTGATAGTAATCGTGGACAGCTCAATGAGAAGAGAATTTTGAATTTAATGAACATTGTTATTCAACTAAGGAAGGTTTGCAACCATCCAGAATTATTTGAAAGGAGTGAGGGAAGCACATACCTTCATTTTGGAGAGATTCCAAATTCTCTTCTACCTCCTCCATTTGGGGAGTTGGAGGATGTATACTATTCTGGGGGTCACAACCCCATTTCATACGAGATACCAAAACTTGTGTATCGAGAAATTATGCAGAGTTCTGAGACTCTTGGTTCAGCTGTTGGTCATGGTGTCTGCAGAGAATCTTTTCTGAAACATTTTAATATTTTTAGACCAGAAAATGTTTATCGATCTGTTTTCCCAGAAGGTATGTGTGTTAGCAGTGGAGGCTTTGGTTTTACCCATATGACGGATTTGTCTCCACAAGAGGTGGCATTTTTGGCTAATGGTTCTTTTATGGAGCAATTGTTATTTTCTATGATGAGATCGGATAAAAAATTCATCGATGAAGTTGTAGATTTTCTTGTTGAGACCATAGATGATGATGATCCAGAATGTAGTAATCTTGAGAAAGGGAAAGTGAGAGCTGTTACTCGAATGTTATTGGTGCCATCAAAATCTGAAACTCAGTTTCTTCAAAGAAGATTTCCAACTGGGCCCAGCCATGCTCCTTTTGAGGCCTTGGTAGTCTCAGATCAGGATAGACTTTTGTCAAATGCAAGGCTGCTTCACTCGGCATACACATATATCCCACGGAGTAGAGCTCCCCCAGTTGGTGTTCACTGCTCTGATAGAAACTTTTACTATAAAATGATTGAAGAATTCCACAATCCTTGGATTAAGAGGTTGTTTGTGGGATTTGCACGTACATCTGAATGTAACGGGCCGAGAATGCCAGATTGTCATCATTTAATTGAAGAAATAGATTCTGAACTACCTGTTTCTCAGCCTGCTCTACAGTTAACACACAGTATTTTTGGGTCTTCTCCACCTATGTGGAATTTTGACCCAGCAAAGTTGTTGACTGACTCTGGGAAGCTTCAAACGCTTGATATATTATTGAGACGCTTAAGAGCTGAAAATCATCGTGTTCTTTTGTTTGCCCAGATGACTAAGATGCTGAACATTTTGGAGGACTATATGAACTACAGAAAATATAGGTATTTCAGACTTGATGGATCATCTACTATACAAGATCGTAGAGACATGGTCAGAGACTTCCAGAATAGGCCTGATATTTTTGTGTTCTTGTTGAGTACAAGAGCTGGTGGACTTGGCATCAACTTGACAGCTGCTGACACAGTCATATTTTACGAGAGTGATTGGAATCCAACATTAGATCTACAGGCAATGGACAGAGCTCATCGTTTGGGTCAGACAAGAGATGTTACTGTTTACCGACTTATATGCAAAGAGACGGTTGAAGAAAAAATTCTTCATAGAGCAAGCCAGAAAAGTACTGTACAAAACCTTGTAATGACTGGGGGTTCTGTTGGTGGTGATCTTTTAGCTCCTGAGGATGTTGTTTCTTTGCTTCTAGATGATCCCCAGTTGGAGCAGAAATTAAAGGAAATTCCCCTCCAGGCAAAGGATAAGCAAAAGAAAAAACAACCTGCAAGGGGCATTTTCTTAAATGAAGAAGGTGATGCATCTCTTCAAGATTTAACCAACGCTGTACCCCAGGGTACTGTGGATAATGATCTTACTGTGGACACAGAGGGTTCAAAGTCTGCTAATAAAAAGAGAAAAGCTGCCTCGGATAAGCAGACTTCAAGGCTGAAGAGTTCTCAGAAGATAAGTGATGTCGGTATTACAGCCATGGACGACGAATTGGATGACCTGAACACTGATCCAGTTGGCCAGAAGCCCAAGAGACCAAAAAGGTTAAAGAAGAGTGTTAATGAGAGGTTCGAAGAGGCCTCTATTGGCACGGCCACTGCCGTCACAGAGCAGACCCAATATCCACCTCCACAGGATTTCACATCCATCGTTCCTAGAGCAGAAACGAGCCTAGACCCCTAA 4528 0.4225 MDHRTKSKDSLNYSTLFNLESLMNFQLPEQDDDFDYYENSSQDESRDSQVGRAVANYSNGNMRGKEVSSAKKRKWSQNGDNEERSCYYRTHVTEERYRSMLGEHIQKYKRRFNDNSSSPAQNQVVAPLLKSSVGSKAHKSGTELRRGLHAAETTSEWMNGSNSQKMGNYRDSDLLKQYCPNRTIYEPAFLDIGDGITYKIPPRYDKLAALLNLPTFSEIHVQDFYLKGTLDLGSLAEMMAADKRFGNRNRIGMGETIPHYESLQARLKVMSASNSPHKFSLKVSDLNSSIPEGAAGNIKRSILSEGGVLQIYYVKVLEKGDTYEIIERSLPKKQKVKKDPALIEKEEMERIGKIWVNIVRRDIPKHQRNFTALHRKQLVDAKRFAENCQREVRLKVSRSIKWTRTAGIRTRKLARDMLLFWKRIDKEMAEVRRREEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSSLISEALPMGDESTNDQDLIDSSTFGRNEEEDHEEAELKKEALKAAQEAVSKQRRLTSAFDTECLRLRQADEADLLQPALSSTMPVASTVRTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNEELERFCPELKRLPYWGGVAERSVLRKSINPKDLYRREAKFHVLITSYQLLVTDEKFFRRVKWQYMVLDEAQAIKSSASIRWKTLLSFNCRNRLLLTGTPIQNNMAELWSLLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVISELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQLNEKRILNLMNIVIQLRKVCNHPELFERSEGSTYLHFGEIPNSLLPPPFGELEDVYYSGGHNPISYEIPKLVYREIMQSSETLGSAVGHGVCRESFLKHFNIFRPENVYRSVFPEGMCVSSGGFGFTHMTDLSPQEVAFLANGSFMEQLLFSMMRSDKKFIDEVVDFLVETIDDDDPECSNLEKGKVRAVTRMLLVPSKSETQFLQRRFPTGPSHAPFEALVVSDQDRLLSNARLLHSAYTYIPRSRAPPVGVHCSDRNFYYKMIEEFHNPWIKRLFVGFARTSECNGPRMPDCHHLIEEIDSELPVSQPALQLTHSIFGSSPPMWNFDPAKLLTDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYFRLDGSSTIQDRRDMVRDFQNRPDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTRDVTVYRLICKETVEEKILHRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDPQLEQKLKEIPLQAKDKQKKKQPARGIFLNEEGDASLQDLTNAVPQGTVDNDLTVDTEGSKSANKKRKAASDKQTSRLKSSQKISDVGITAMDDELDDLNTDPVGQKPKRPKRLKKSVNERFEEASIGTATAVTEQTQYPPPQDFTSIVPRAETSLDP 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01146 1519 SMART helicmild6 1221 1304 IPR001650 -
Arst6g01146 1519 Coils Coil 426 465 - -
Arst6g01146 1519 Gene3D - 815 885 IPR027417 -
Arst6g01146 1519 Pfam Helicase conserved C-terminal domain 1195 1304 IPR001650 -
Arst6g01146 1519 MobiDBLite consensus disorder prediction 1490 1511 - -
Arst6g01146 1519 ProSiteProfiles DBINO domain profile. 354 479 IPR020838 GO:0003677
Arst6g01146 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 560 805 IPR027417 -
Arst6g01146 1519 FunFam DNA helicase INO80-like protein 1163 1415 - -
Arst6g01146 1519 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 589 760 IPR014001 -
Arst6g01146 1519 MobiDBLite consensus disorder prediction 32 81 - -
Arst6g01146 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 1372 IPR027417 -
Arst6g01146 1519 MobiDBLite consensus disorder prediction 1404 1519 - -
Arst6g01146 1519 MobiDBLite consensus disorder prediction 66 81 - -
Arst6g01146 1519 Coils Coil 503 530 - -
Arst6g01146 1519 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1195 1345 IPR001650 -
Arst6g01146 1519 FunFam Putative DNA helicase INO80 546 827 - -
Arst6g01146 1519 Gene3D - 573 814 IPR038718 -
Arst6g01146 1519 MobiDBLite consensus disorder prediction 1420 1435 - -
Arst6g01146 1519 MobiDBLite consensus disorder prediction 1404 1419 - -
Arst6g01146 1519 SMART ultradead3 573 768 IPR014001 -
Arst6g01146 1519 MobiDBLite consensus disorder prediction 43 65 - -
Arst6g01146 1519 PANTHER HELICASE SRCAP-RELATED 61 530 - -
Arst6g01146 1519 PANTHER HELICASE SRCAP-RELATED 61 530 - -
Arst6g01146 1519 Gene3D - 1164 1404 IPR027417 -
Arst6g01146 1519 CDD SF2_C_SNF 1183 1315 - -
Arst6g01146 1519 Pfam SNF2-related domain 592 879 IPR000330 GO:0005524|GO:0140658
Arst6g01146 1519 Pfam DNA-binding domain 349 477 IPR020838 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01146 Arst-Chr6 10525322 10535765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01146 630 878 RAD5 or RAD16-like Gene Family AT1G61140 23.871 2.70e-11 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Arst6g01146 SNF2_N 3.6e-66 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01146 K11665 - gmx:100780615 2446.77