Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01104 ATGTCCATGATGCTTGCATTATCCTCTCCAACAAGTATGTTCCCTAATAACATGGAATGGCCCTTAGAGTTAGAAGAAGAAGAACTAAGTCATAGTCATCATGAATACTTCAACTCAGAAGAGTATCCATTACTCTCTTCTTCCATGGCCAAGAAATTTAATCACAATGCAAACGAGCGCCACCGCCGCAAGAAGATCAATGCCTTGTACTCTTCTCTCCGGTCAATCCTCCCTGTTGCAGATCAAACGAAGAAGATGAGCATCCCAGCAACAATTTCAAGAGTGTTGAAATACATACCTGAGTTGCAACAACAGGTGGAAGAACTGATCAAGAAAAAGGAGGAGCTCTTGTTGAGAATTTCTCGGCAAGGGGATATTAATAATGATGATGCTGCAGCAGCAGCAGCAATGAACAAGAAAGGCCATCATCATCAGAACTCTTCTGGCTTTCTGGTTTCATCAAGTACGATCAGTGACAGTGAAGTTAGTATTCAGATCATTTCTTCTTATGGAATTCAAAAGTGTCAAGTATCTGAAATCTTGGTGTGTTTAGAAAATCACTATGCCCTTCAACTGCTAAATGCTTCTTCCTTTGACACCTTTGGAGGAAGACTCTTCTACAACCTGCATTTTCAGATGGAAATGGCTCATACATTAGACACAGAAGTTCTCAGCGAGAAGATCTTGTCAATATGTGAGAAGCATCAAAGGATATAA 717 0.4045 MSMMLALSSPTSMFPNNMEWPLELEEEELSHSHHEYFNSEEYPLLSSSMAKKFNHNANERHRRKKINALYSSLRSILPVADQTKKMSIPATISRVLKYIPELQQQVEELIKKKEELLLRISRQGDINNDDAAAAAAMNKKGHHHQNSSGFLVSSSTISDSEVSIQIISSYGIQKCQVSEILVCLENHYALQLLNASSFDTFGGRLFYNLHFQMEMAHTLDTEVLSEKILSICEKHQRI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01104 238 Coils Coil 99 119 - -
Arst6g01104 238 Gene3D - 45 128 IPR036638 GO:0046983
Arst6g01104 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 50 102 IPR011598 GO:0046983
Arst6g01104 238 FunFam Transcription factor ORG2 46 131 - -
Arst6g01104 238 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 49 228 - -
Arst6g01104 238 SMART finulus 56 108 IPR011598 GO:0046983
Arst6g01104 238 CDD bHLH_AtORG2_like 51 123 - -
Arst6g01104 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 120 IPR036638 GO:0046983
Arst6g01104 238 Pfam Helix-loop-helix DNA-binding domain 54 103 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01104 49 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 45.789 3.75e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst6g01104 HLH 8.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01104 - - adu:107492670 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01104 6 9992751 9993856 Arst6g01104 6 9992751 9993856 ECH