Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01099 ATGGGGATGGCTGCTGCAGCTGCTACAGAGTCACAGCAGTTTCATGTGTTGGCTGTTGATGACAGCCTCATAGATAGAAAGCTTATTGAGAGGCTCCTAAGAACTTCTTCTTACCAAGTTACTACAGTTGATTCTGGGACCAAAGCTTTAGAATTTCTGGGCTTGCGTGAGAATGATGATGGCACCCCAAATACACCTTCTATTTCTCCTAACAATCATCAGGAGGTGGAGGTGAATATGGTTATAACAGATTACTGTATGCCTGGGATGACTGGCTATGATTTGCTCAAGAAAATCAAGGAATCTTCATCTCTTAGAAACATACCAGTGGTGATTATGTCATCAGAGAATGTGCCTTCAAGAATTAGCAG 371 0.4232 MGMAAAAATESQQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGTKALEFLGLRENDDGTPNTPSISPNNHQEVEVNMVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNRLKPHIMKRSKLKDQDQKQVIPEKIDTLLEVQKQHQPQEEAQPQVQPNLEQQQQQQSLQQNNNNNNSSNKRKSMEQSLLPETTDRTRPRYSGIATVV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01099 241 SUPERFAMILY CheY-like 13 164 IPR011006 -
Arst6g01099 241 SMART REC_2 14 150 IPR001789 GO:0000160
Arst6g01099 241 Gene3D - 15 231 - -
Arst6g01099 241 CDD REC_typeA_ARR 16 146 - -
Arst6g01099 241 MobiDBLite consensus disorder prediction 177 228 - -
Arst6g01099 241 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 214 IPR045279 GO:0009736
Arst6g01099 241 ProSiteProfiles Response regulatory domain profile. 15 151 IPR001789 GO:0000160
Arst6g01099 241 MobiDBLite consensus disorder prediction 177 241 - -
Arst6g01099 241 Pfam Response regulator receiver domain 16 143 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01099 Arst-Chr6 9925560 9927187 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01099 1 241 Response Regulator Gene Family AT3G57040 59.766 3.13e-94 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst6g01099 Response_reg 1.9e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01099 K14492 - gmx:100788079 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01099 6 9925560 9927187 Arst6g01099 6 9925560 9927187 ECH