Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01075 ATGTCTTCTACACTTGAGGAATCTCTAAGATCTCTATCGTTGGATTACCTCAACCTGCTCATCAACGGTCAGGCCTTCAGCGACGTCACCTTCAGCGTCGAGGGGCGTCTAGTACACGCGCACCGCTGTATCCTGGCGGCAAGAAGTCTATTCTTCAGGAAATTCTTCTGCGGGCCCGACCCTCCTTCGCCCTCTGGCCTCGATCCTCCAGGACAGAGGATGAACTCGGGGTCGGGCTGCAGAACCCCTACAGGGGTAATACCCGTGAACTCCGTGGGGTACGAGGTGTTCCTGCTCATGCTGCAGTTTCTGTACAGCGGGCAGGTATCCATCGTCCCCCAGAAGCACGAGCCACGGGCCAATTGCGGCGAGAGGGGCTGCTGGCACACGCATTGCTCCTCCGCCGTCGATCTTGCTCTAGACACACTCGCCGCCGCTAGATACTTCGGCGTTGAGCAGCTCGCATTGCTAACTCAGAAACAACTAGCAAGCATGGTGGAGAAAGCTTCCATTGAAGATGTGATGAAGGTCTTGGTAGCTTCAAGAAAGCAAGACATGCACCAACTGTGGACCACATGCTCCCACCTTGTAGCCAAATCCGGTCTCCCACCGGAGGTTCTCGCCAAGCACCTCCCCATCGACATCGTCGCCAAAATCGAAGACCTCCGTCTAAAATCCTCCCTCGCCCGCCGTACCGCCGCCTTCCTCCCCCACCACCACCACCCGGACCTCTCCGCCGCGGCAGACCTCGAGGACCAAAAGATCCGCCGGATGAGGCGAGCGCTAGACTCATCCGACGTGGAGCTCGTAAAGCTAATGGTAATGGGAGAAGGGCTCAATCTCGACGACGCATTAGCTCTGCATTACGCCGTCGAGAATTGTAGCCGCGAAGTGGTGAAAGCGCTGCTGGAACTCGGGGCAGCCGATGTCAACTATCCCGCAGGTCCAGCAGGAAAAACACCACTTCATATCGCGGCGGAAATGGTTTCGCCCGATATGGTAGCGGTCCTGCTGGACCACCACGCAGACCCAAACGTGAGAACCATCGACAACGTGACGCCATTGGACACACTAAGAACCCTAACCTCCGATTTTCTGTTCAAAGGCGCAGTCCCTGGCCTGACTCACATTGAACCAAACAAATTAAGGCTGTGTTTGGAGCTTGTTCAATCGGCGGCACTTGTTTTGTCTCGTGAAGAAGGTAACGCCAATAACAACAATGTTGCTTCTTCTACAACTCCACATCATCATCATATTTATCCTCCTTCCATGAACGAAGATCATCATAGCAGTTCAAGCAGTGGCGGCAACAATAACAATAACACCAACATTAACTTGGATTCCAGGTTGGTGTATCTTAACCTTGGTGCCACCTTAGGTGGTGGTGGTGGTGGCGGCGCCTCCGGTCAAATGAGTTCAAGGTTGGATGGTGATGATGATAACCGTCATGGTGAAGTAGCAATGTACCATCACCACCACCACCATCATCACCATTCTCATCATGACTTTTAG 1512 0.5384 MSSTLEESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSPSGLDPPGQRMNSGSGCRTPTGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEPRANCGERGCWHTHCSSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLVASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDIVAKIEDLRLKSSLARRTAAFLPHHHHPDLSAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTIDNVTPLDTLRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNANNNNVASSTTPHHHHIYPPSMNEDHHSSSSSGGNNNNNTNINLDSRLVYLNLGATLGGGGGGGASGQMSSRLDGDDDNRHGEVAMYHHHHHHHHHSHHDF 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01075 503 MobiDBLite consensus disorder prediction 404 443 - -
Arst6g01075 503 ProSiteProfiles BTB domain profile. 27 113 IPR000210 GO:0005515
Arst6g01075 503 Pfam BTB/POZ domain 18 116 IPR000210 GO:0005515
Arst6g01075 503 CDD BTB_POZ_NPR_plant 10 166 - -
Arst6g01075 503 ProSiteProfiles Ankyrin repeat profile. 317 349 IPR002110 GO:0005515
Arst6g01075 503 SUPERFAMILY Ankyrin repeat 276 359 IPR036770 -
Arst6g01075 503 FunFam regulatory protein NPR5 isoform X1 6 199 - -
Arst6g01075 503 MobiDBLite consensus disorder prediction 404 418 - -
Arst6g01075 503 FunFam regulatory protein NPR5 isoform X2 248 365 - -
Arst6g01075 503 ProSiteProfiles Ankyrin repeat region circular profile. 317 347 - -
Arst6g01075 503 Pfam Ankyrin repeats (3 copies) 265 347 IPR002110 GO:0005515
Arst6g01075 503 SMART ANK_2a 282 312 IPR002110 GO:0005515
Arst6g01075 503 SMART ANK_2a 317 346 IPR002110 GO:0005515
Arst6g01075 503 SMART BTB_4 27 166 IPR000210 GO:0005515
Arst6g01075 503 MobiDBLite consensus disorder prediction 425 443 - -
Arst6g01075 503 Gene3D Potassium Channel Kv1.1; Chain A 2 199 IPR011333 -
Arst6g01075 503 MobiDBLite consensus disorder prediction 462 483 - -
Arst6g01075 503 SUPERFAMILY POZ domain 10 164 IPR011333 -
Arst6g01075 503 Gene3D - 248 365 IPR036770 -
Arst6g01075 503 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 4 491 IPR044284 GO:0099402
Arst6g01075 503 Pfam Domain of unknown function (DUF3420) 201 259 IPR024228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01075 Arst-Chr6 9781766 9788277 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst6g01075 BTB 2.7e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01075 K14508 - qsu:112012060 721.079