Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01062 ATGGGTAGTAGAGCTAGAACAGTTAACGTTAGCAGCACTGGGGACAGTAACAACGTTGTCAACGGGATGCCAAGTTACGCTCCTCCACCTCCTATGCCTTCTTCTTCTAGTTCCATGGGCATTGATGCAACTAATGTTCTTCCTTCTCGAATTTCTGAATTTGGAAACCTTGAACAGTCTCTAGGATTTCGGGTTGAGGATGCCATTAATCTTAGCAGAAATCCATTGTTTAATCAACTTCAACTGAAATCAAATAGCCAAGCTCTAGGTGCTGATGTTCAATTTGGTGCTTTAAGTAAGATGCAGTCAATTGCAAACTCGGATATAAACATATCTGCAGCAATTGCTGGCTCTCAAACGTTGTCATTACAAAAGGATTCGCAACCAAATCTGGCTTCGACATCTGCTGGTCATCGTGAGAACTGGGGAGAGTCCAACATGGCAGATGCAAGCCCTAGGACAGATACTTCAACAGATGATACAGAAGATAAAAATCAAATGCCCGAAAGGGGTGAATCCAGTGAAAGATCAAAAGATAAAGCAGATCAAAAGACGTTACGGCGGCTTGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGGTTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGCAGTAGGCTGAAACTGACCCAACTTGAGCAGGAGCTGCAGCGGGCCCGCCAGCAGGGAATATTTATTTCAAGCTCAGGAGATCAGACCCATTCAATGAGTGGAAATGGTGCTATGGCTTTTGACGTAGAGTATGCACGATGGTTGGAAGAGCATAATAGGCAAACCAATGAGCTAAGGGCTGCAATAAATTCTCATGCTGGAGATATTGAACTTCGTACTATTGTCGACAATTTCATGACGCAATTTGATGACATCTTCAGGCTCAAAGGTATTGCTGCAAAAGCCGATGTTTTCCACATTCTTTCAGGGATGTGGAAAACTCCAGCTGAGAGGTGTTTCATGTGGATCGGAGGCTTTCGCTCATCCGAGCTTCTTAAACTTCTTGTAAATCAACTGGAGCCATTAACCGAGCAACAATTGATGGGCATCTACAACTTGCAGCAGTCATCGCAGCAGGCCGAAGATGCATTGTCTCAGGGAATGGATGCATTGCAGCAATCACTTGCTGAGACATTGGCGAATGGTGCACCCAACCCATCAGGCTCTTCAGGAAATGTAGCAAACTATATGGGGCAAATGGCTATGGCTATGGGAAAGCTCGGTACTCTCGAAGGGTTTCTTCGCCAGGCTGATAATCTGCGGCAACAAACATTACAACAAATGCTTCGAATTTTGACAACTAGGCAATCAGCTAGAGCTCTCCTTGCGATTAGTGATTATTTCTCGCGGCTGCGAGCTCTAAGTTCTTTGTGGCTTGCCCGACCAAGGGAATGA 1410 0.4504 MGSRARTVNVSSTGDSNNVVNGMPSYAPPPPMPSSSSSMGIDATNVLPSRISEFGNLEQSLGFRVEDAINLSRNPLFNQLQLKSNSQALGADVQFGALSKMQSIANSDINISAAIAGSQTLSLQKDSQPNLASTSAGHRENWGESNMADASPRTDTSTDDTEDKNQMPERGESSERSKDKADQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTHSMSGNGAMAFDVEYARWLEEHNRQTNELRAAINSHAGDIELRTIVDNFMTQFDDIFRLKGIAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMDALQQSLAETLANGAPNPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01062 469 CDD bZIP_HBP1b-like 184 236 - -
Arst6g01062 469 MobiDBLite consensus disorder prediction 125 185 - -
Arst6g01062 469 MobiDBLite consensus disorder prediction 155 185 - -
Arst6g01062 469 Gene3D - 183 235 - -
Arst6g01062 469 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 226 IPR004827 GO:0003700|GO:0006355
Arst6g01062 469 FunFam BZIP family transcription factor 183 232 - -
Arst6g01062 469 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Arst6g01062 469 PANTHER TRANSCRIPTION FACTOR TGA9 136 469 - -
Arst6g01062 469 Pfam bZIP transcription factor 183 224 IPR004827 GO:0003700|GO:0006355
Arst6g01062 469 Coils Coil 203 230 - -
Arst6g01062 469 ProSiteProfiles DOG1 domain profile. 249 466 IPR025422 GO:0006351|GO:0043565
Arst6g01062 469 SMART brlzneu 180 243 IPR004827 GO:0003700|GO:0006355
Arst6g01062 469 MobiDBLite consensus disorder prediction 1 38 - -
Arst6g01062 469 MobiDBLite consensus disorder prediction 125 154 - -
Arst6g01062 469 SUPERFAMILY Leucine zipper domain 184 227 IPR046347 GO:0003700|GO:0006355
Arst6g01062 469 MobiDBLite consensus disorder prediction 1 23 - -
Arst6g01062 469 Pfam Seed dormancy control 267 341 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01062 Arst-Chr6 9593784 9600219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01062 147 469 bZIP Transcription Factor Family AT3G12250 75.831 1.37e-176 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst6g01062 DOG1 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01062 K14431 - gmx:778136 769.615