Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01027 ATGGCTGCTGCTGCTGCTGCTGCTGCTCCTACCGAAGTTGATCCCACACAGCTCGACGTTAAGCTCTTCAACAGATGGAGCTTCGACGATGTCCAGGTGACTGATATCTCCCTGGCTGATTACATTGGAGTGGTGCCGTCGAAGCATGCGACGTACGTTCCCCACACCGCCGGTAGGTACTCAGTGAAGCGTTTCAGGAAGGCACAGTGCCCGATCGTTGAGAGGCTCACTAACTCCCTTATGATGCATGGAAGAAACAACGGTAAGAAGCTTATGGCTGTTAGGATCATCAAACACGCCATGGAAATCATTCACTTGCTTACAGACCAGAACCCTATCCAAGTCATCGTTGATGCCGTTATCAACAGTGGTCCTCGTGAAGATGCAACTCGTATTGGGTCTGCTGGAGTTGTTAGGAGGCAGGCTGTTGATATCTCGCCTCTTCGCCGTGTCAATCAGGCCATCTATCTTCTAACAACAGGTGCACGAGAAGCTGCTTTCAGGAACATTAAGACAATTGCCGAATGCTTGGCTGATGAACTTATTAACGCAGCAAAAGGTTCATCCAATAGCTATGCTATCAAGAAAAAGGATGAGATAGAGAGAGTCGCCAAGGCTAATCGTTAA 627 0.488 MAAAAAAAAPTEVDPTQLDVKLFNRWSFDDVQVTDISLADYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01027 208 Gene3D Ribosomal protein S7 domain 2 208 IPR036823 -
Arst6g01027 208 PANTHER RIBOSOMAL PROTEIN S7 7 208 IPR000235 GO:0006412
Arst6g01027 208 CDD uS7_Eukaryote 21 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Arst6g01027 208 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 208 IPR000235 GO:0006412
Arst6g01027 208 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Arst6g01027 208 NCBIfam 30S ribosomal protein S7 20 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Arst6g01027 208 FunFam 40S ribosomal protein S5 4 208 - -
Arst6g01027 208 SUPERFAMILY Ribosomal protein S7 21 208 IPR036823 -
Arst6g01027 208 Pfam Ribosomal protein S7p/S5e 62 208 IPR023798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01027 Arst-Chr6 9350680 9353266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g01027 1 208 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 88.462 1.66e-136 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g01027 K02989 - gmx:100815850 374.4