Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00964 ATGGACGCTGATGGAGTCACCGCCTCTTCCTCTCCAAACGCTGCTGACGAAGGTGTGAATAATTATAAAAAAGATGGTGATGAGTTGTATGAGAGAGTGTGGCGAGCATGCGCGGGAGAATGTGTATATATCCCCCGTGTCGGAGATAAGGTGCTGTACTTCCCTCAGGGCTACTTAGAACAGGTTGCTTCATTCACTCAGCATCAGCAAGATGGTCACGTGGATATTCCTGTGCATAATCTACCTTCTAAGATCCTGTGCCGGGTTGTGTCTGTTCAGTTAAAGACTGAAGCTTCTAGAGACGAGGTTTTTGCTCAAGTTACTCTACTTCCAGAGTCCAAGCAAGATGAACTTAGTTCCAAGGACACAGACACAGCTCAGATACCCAGCAGATCTTCTGTATACTCCTTTAGCAAGATACTTACTTCATCAGACTCTGGTGCTCATGGCGGATTCTCTATTCCCAAGAGGCATGCTTATGAATGCTTCCCCCCTCTGGACATGACTCTTAAACCCCCAGCACAAGAGCTTGTTGCAAGAGACTTGCATGGGTACGACTGGCGCTTCCGACATATATTTCGTGGTCAGCCAAGACGAAACTTACTTACTAGCGGTTGGAGCACATTTTTAAACTCCAAAAAACTTGCTGCTGGAGATACATGCATATTCTTCAGGGGAGAAAACGGAGAACTCCGAATTGGGGTTCGTCGAGCTATGAAACGGCAAAATATTGCATCCCCATCTGCTTCTCTGATATCAGCTCATAGCATGCAACTAGGAATACTGGCAAGTGCTTCCAATGCTGTTGCCACAGGATCCATGTTCACTGTATACCACTACCCTCGGACGAATCCCTTTGAATTTATCATTCCTTTGCAACGCTACATGAAGTCAACTCAAATGAGCTATGCAACTGGTATGAGAGTACAATTGCTGCTTGATGTTGAAGAACCTAGAAAAAGATATGCAGGTACAGTAATCAGTATGGAAGATTTTGATGGCATTAGGTGGCCTGGTTCTGAATGGAGAAGCCTCAAGGTCCAATGGGATGCTACACCGCATGCAGATATGCATCCAGAAAGAGTTTGTCCTTGGTGGATTGAGGCCTTGGACTGTGCCAAGCAGAAACACATTCCTATTCTCCCCGCACCAAAGAAAGCCCGTCCAAATAACCTGCCGTTGCCTGAATTAAGTGGCTTTGTCAAGGATGAGATAATTCGGTATTCATCTAAGCCTACAGCTCAGAGATTGGAAAGGGACTTACAAGGTCAAGACTACAATGATGTAGCTTCTCCACAGCCTGTGCTAAAACAACCATCATCAAAGGTTATTTGTAACTCAAACCTTGGGATTGAGAATCAGCTTCGAATTCCGATTCAAGACCCTGTTCACCAGTGTACTGGAAGCTCAATGTCGTTTCCACATGAAGACTTGTCAACTTCCAGTTCAAATGCGTACTGTCCGGGATCTGAATCCCAAGGATGGCCTTCTTCTGAATCTAAAGATGAAAACGATGTTCCTTTTGGCCCACATAGCAGTTGTACTACATACAAGCTTTTTGGGATTTACTTAACTGATTGCCAATCGGAGCTCCCTTCACCACAATTTTCTGCTTACAGCAAGATTCCAAGTACCATTTCTATTCCTCCAATGTCTCACTCAAGTATTTATGCAACAATCCAGGCAGCAAAACAGTGCGGAAATATTCAAGGTGTTTCCTCAGAGAAAAGATGCAAGAAGTGTCGCTCTGATAATAGTAGAAGTTGCACAAAGGTTCTTAAGCAAGGAACTGCTCTTGGCAGAGCAATTGATCTCACTCGTTTTGCTGGATATGACGAACTCATTTCTGAACTTGACTGGATGTTTGATTTTGGCGGAGGCTTAATTAATGGAAGCAGTGGATGGCATGTGACCTGCATAGACGAGGATGGAGATATTTTGCTCCTGGGAGATTTCCCATGGCAGGACTTTCGATCCATGGTGCAAAAGATGATAATACGTCCAAAGGATGCAATTAACAATCCTAGTCCAAGCTCCTCTGCATATCCTGCAAGCATTTAG 2061 0.4454 MDADGVTASSSPNAADEGVNNYKKDGDELYERVWRACAGECVYIPRVGDKVLYFPQGYLEQVASFTQHQQDGHVDIPVHNLPSKILCRVVSVQLKTEASRDEVFAQVTLLPESKQDELSSKDTDTAQIPSRSSVYSFSKILTSSDSGAHGGFSIPKRHAYECFPPLDMTLKPPAQELVARDLHGYDWRFRHIFRGQPRRNLLTSGWSTFLNSKKLAAGDTCIFFRGENGELRIGVRRAMKRQNIASPSASLISAHSMQLGILASASNAVATGSMFTVYHYPRTNPFEFIIPLQRYMKSTQMSYATGMRVQLLLDVEEPRKRYAGTVISMEDFDGIRWPGSEWRSLKVQWDATPHADMHPERVCPWWIEALDCAKQKHIPILPAPKKARPNNLPLPELSGFVKDEIIRYSSKPTAQRLERDLQGQDYNDVASPQPVLKQPSSKVICNSNLGIENQLRIPIQDPVHQCTGSSMSFPHEDLSTSSSNAYCPGSESQGWPSSESKDENDVPFGPHSSCTTYKLFGIYLTDCQSELPSPQFSAYSKIPSTISIPPMSHSSIYATIQAAKQCGNIQGVSSEKRCKKCRSDNSRSCTKVLKQGTALGRAIDLTRFAGYDELISELDWMFDFGGGLINGSSGWHVTCIDEDGDILLLGDFPWQDFRSMVQKMIIRPKDAINNPSPSSSAYPASI 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00964 686 Gene3D - 134 239 IPR015300 -
Arst6g00964 686 MobiDBLite consensus disorder prediction 468 507 - -
Arst6g00964 686 MobiDBLite consensus disorder prediction 1 17 - -
Arst6g00964 686 Pfam B3 DNA binding domain 137 238 IPR003340 GO:0003677
Arst6g00964 686 ProSiteProfiles B3 DNA-binding domain profile. 137 239 IPR003340 GO:0003677
Arst6g00964 686 MobiDBLite consensus disorder prediction 1 22 - -
Arst6g00964 686 ProSiteProfiles PB1 domain profile. 587 669 IPR000270 GO:0005515
Arst6g00964 686 SUPERFAMILY CAD & PB1 domains 589 663 - -
Arst6g00964 686 CDD B3_DNA 136 237 IPR003340 GO:0003677
Arst6g00964 686 FunFam Auxin response factor 135 239 - -
Arst6g00964 686 SMART B3_2 137 239 IPR003340 GO:0003677
Arst6g00964 686 Pfam Auxin response factor 265 346 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst6g00964 686 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 28 668 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst6g00964 686 Gene3D - 582 674 - -
Arst6g00964 686 Gene3D - 303 376 - -
Arst6g00964 686 MobiDBLite consensus disorder prediction 468 500 - -
Arst6g00964 686 Pfam AUX/IAA family 584 672 IPR033389 -
Arst6g00964 686 SUPERFAMILY DNA-binding pseudobarrel domain 125 261 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00964 Arst-Chr6 8675838 8687695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00964 580 679 B3 DNA Binding Superfamily AT5G62000 44.000 6.95e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst6g00964 AUX_IAA 5.7e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00964 - - lja:Lj1g3v4764520.2 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00964 6 8675838 8687695 Arst6g00964 6 8675838 8687695 ECH