Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00954 ATGGCAGAGCTAAGTGCGGCTGCAACCTTCACACCCAGCGATGAAGAACTCATTCATTTCCTCTCCGACAAGGTGAAAGGCCAATCCATGGACGAGGACGCCGCCATCAACATCCACGAATGTGAATACTTGTACGGCCGCAACAAGAACCCTTGGGACATTTGGCGTGACTTCGCGGGCGACGTTGATGCCGGCAGGACCGCCCTTTTCTTCTTCTCCCCCAACAAGAAGCACCATTCCACCGCCTCTCGCCCCATCGGAGCCGGCGTCTGGGAAGCTGAAGCAGAAACCATTGACGGCGAAGGCATCGTTGGCAAGGGCAAGAACCGCCGTATTGGGACCAAGAAATGTTTCATCTTTGACAAGAGTGGCACCTCCTACGATGGTGCATGGATCTTGCATGAATACACTCTTCATGGATCGTCGCTCCACACTAATACTTCAGTGGATAATAGCTATGTTATATGCAAATTGATAAAGAATGTAGAAGGTGAAGCTCATCCAGTTGAGGTGCAGTTTGGAGACAAAAGAAAAAGGCATGCGCAATCCGCCACCACCAGCGGCGTTCAAATTGATGTTAACGCTCCTCATTCATATGTGGTGCTGACCACTTGTCATATATATTTTAAGAGGAACACTAAAGAACAAGAGGTCCAATTCATACCAAATGAACTTGGCAGGCGAATGTTGTTGGAAAGGAAATATGATGAGGATGGTTTAATTCTTTCTTTCATTGTTAAACAAGGATTACCAATCACGAACGAGAACCTCATCAGAAACCTCATGCAGCTGCAAGGGGGAACAAGAAGAGGTGGAAAAGGCCTCTAA 828 0.4783 MAELSAAATFTPSDEELIHFLSDKVKGQSMDEDAAINIHECEYLYGRNKNPWDIWRDFAGDVDAGRTALFFFSPNKKHHSTASRPIGAGVWEAEAETIDGEGIVGKGKNRRIGTKKCFIFDKSGTSYDGAWILHEYTLHGSSLHTNTSVDNSYVICKLIKNVEGEAHPVEVQFGDKRKRHAQSATTSGVQIDVNAPHSYVVLTTCHIYFKRNTKEQEVQFIPNELGRRMLLERKYDEDGLILSFIVKQGLPITNENLIRNLMQLQGGTRRGGKGL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00954 275 Gene3D NAC domain 13 164 IPR036093 GO:0003677|GO:0006355
Arst6g00954 275 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Arst6g00954 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 178 - -
Arst6g00954 275 Pfam No apical meristem (NAM) protein 9 138 IPR003441 GO:0003677|GO:0006355
Arst6g00954 275 ProSiteProfiles NAC domain profile. 4 161 IPR003441 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00954 1 170 NAC Transcription Factor Family AT5G24590 30.556 6.52e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g00954 NAM 2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00954 - - ahf:112756623 540.421