Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00925 ATGGTGGAACAGAGGAAGCCTCTCGTTCTCTCTTCCACCAAACACCTCATCAATTCCTTGTTGAGCTCTTCCCCAAGCAACGACCCTGCAACCGCCACCGCCACTACCATTCCCCTCTTCCAATTACCTGTGGGGATTCTCCGATTCTCCGACCACCCGAATCACCATCCCCAACTACCTTCTCTTGACGATTCTGCCCTTGTTGGCCTCTCCACTTTACTTCTTAAGAGGCTCTCTGTCACTTCTGGTTCACTGGTTCTGGTGAAGAATGCTGAGATGGGTGTGCAGAGGGTTGCTGTGGCCATTGCTCTTGATCCTCCAGGAACTACTACTACACTTGAGCCTGATTCTGATTTGAATTTATCATCATCTTCTTCTCATCCTGCCAGAGTAATGCTTGTGTTTCCTTCTTGTGATTTCCCTGCTAGTGGGGCCGTGTTGTTTGATCATGAAGTTGCTTATTTGTCTCCACTTTTAGCATTTAATCTAAATTTGCACATGTCATGCTTAAAATCCATTCTACAACATGGGGAGGACACTTTAGCTTCTTATTTCAAGCCCCAATTTTGTAATGAGGATGCTGCAAAAAGCAGTGAGGATTATGTTATCAATGTTGAGTTGGCACCTTTTGCCCAAGCTCTTAGGTTTGCATCACATTTGAGGGTTTCTTTTGTGAAGATGCCAGAATGTGGCATCCTTGAATCTATCAGAGAAAGTTCACCTATTGAATCTAAAGAACGGCAAGACATGATTGACTTAGCATTACAAAAGTACTTCGAAGTCGATAGATATTTGTCAAGAGGAGATGTTTTTGGGATTAACATAAACTGGAAATGCAATTCAACTATTTGCATTCCGTGCAACCAAAAATCAGATAAGAAAAATGACAGTAACCTTATCTACTTCAAGGTCATTGCTATGGAACCATCAGATGAACCGTTCCTTCGAGTCAATAAAACCTCAACTGCTCTGGTCCTAGGAGGGAGTTCACCATCCGCCCTTCCTCCAGATTTGTTAATTGCTGGACCAGAAGGACCTGTGCCGTTGCAAGGAGACACAGTAAAGATATTGGGTTCAATACTTACACCAACTTTCTGTCCATCGGCCCTTTCTTCGAAATTTAGAATTTCAGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAGAGAACTGTAGTTAGATATGTTGCTCGTCGACTGGGCTTGCATGTGGTGGAATATAACTGTCATGATCTGATGGCGTCTGAAAGAAAATCTATTGCTTTGGCTCAAGCTTTCAAGACAGCTCAAAGATACTCACCAGCAATACTTCTTCTACGGCATTTTGATGTTTTTCGAGATTCACCTTCTCCCGATGGTTCACTAAATGATCAAAGAGGCAATACATCTGAAGTAGCATCTGTTATCAGGAGATTCACTGAACCAATTAGTGAACATGATAGCAACTCCAGGGGAAAATCAAATGGTGAATTTGTTGAGAAGAATGTTGAGAAAACAAGCGTGCATCAAATCCTCTTGATTGCTGCTGCTGACAGCTCAGAAGGTCTACCTCCAACTATCAGACGCTGCTTTAGCCATGAAATAAGTATGGGACCTTTGACTGAAGAGCAAAGGACTGAAATGTTATCCCACTCACTTCAAAGTGTTTCTGGACTCCTCTCTGATCCTGATTTGGAGGGTTTTGTAAAAGAAATAGTTGGTCAAACATCTGGTTTTATGCCTAGGGATATGTGTGCTCTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGGAACGATACTGAAATGGACAAGCATAGGTTTGAGGATATAGATGCTTCTTCTAGTTCCAAAATGACACAGGAGAAGGAGAAAGTTTCACCTCAAATTCCTAGGAAGGAAGATTTAATGAATGCTTTAGAACGATCAAAGAAAAGAAATGCATCAGCATTGGGAACTCCAAAAGTTCCCAATGTGAAATGGGAAGATGTCGGTGGGCTTGAAGAAGTCAAAAAATCAATCCTAGATACTGTTCAGTTGCCCCTCCTGCATAAAGATCTTTTTGCATCTGGATTACGCAAGAGATCCGGCGTTCTTCTGTACGGTCCTCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACTGAATGTTCCTTAAATTTTCTTAGTGTAAAAGGTCCTGAACTGATAAACATGTACATCGGAGAGTCTGAGAAGAATGTTAGAGACATTTTCCAGAAGGCCAGATCAGCACGTCCATGTGTTATCTTCTTCGATGAGCTTGATTCTCTCGCCCCAGCTCGGGGTGCTTCTGGAGATTCTGGGGGCGTTATGGACAGGGTGGTTTCTCAGATGCTAGCCGAGATCGATGGCTTAAGTGATTCGACGCAGGATCTGTTTATTATTGGTGCAAGTAATAGACCGGATTTGATAGATCCGGCACTTCTACGGCCCGGTAGATTTGATAAGCTTCTATATGTTGGAGTTAACTCCGATGCGTCTTATAGGGAGCGGGTCTTGAAAGCACTAACTCGAAAGTTCAAGTTGCATGAAGATGTCTCACTGTACTCTATAGCGAAAAAATGCCCGCCGAACTTCACCGGAGCTGACATGTATGCATTGTGTGCAGACGCCTGGTTCCATGCCGCGAAGCGCAAGGTTTCGAGCACAAATCCGGAGTCTTCCAGCCAAGATAGTGAAGCAGATTCTGTAGTTGTTGAATACAGTGATTTTGTCCAGGTCTTAGTAGAGCTGTCTCCTTCCCTCTCCATGGCTGAGCTCCAGAAGTATGAGAAACTTAGAGATCAGTTTGAGGGCACCTCTAAATAA 2811 0.4337 MVEQRKPLVLSSTKHLINSLLSSSPSNDPATATATTIPLFQLPVGILRFSDHPNHHPQLPSLDDSALVGLSTLLLKRLSVTSGSLVLVKNAEMGVQRVAVAIALDPPGTTTTLEPDSDLNLSSSSSHPARVMLVFPSCDFPASGAVLFDHEVAYLSPLLAFNLNLHMSCLKSILQHGEDTLASYFKPQFCNEDAAKSSEDYVINVELAPFAQALRFASHLRVSFVKMPECGILESIRESSPIESKERQDMIDLALQKYFEVDRYLSRGDVFGININWKCNSTICIPCNQKSDKKNDSNLIYFKVIAMEPSDEPFLRVNKTSTALVLGGSSPSALPPDLLIAGPEGPVPLQGDTVKILGSILTPTFCPSALSSKFRISVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDLMASERKSIALAQAFKTAQRYSPAILLLRHFDVFRDSPSPDGSLNDQRGNTSEVASVIRRFTEPISEHDSNSRGKSNGEFVEKNVEKTSVHQILLIAAADSSEGLPPTIRRCFSHEISMGPLTEEQRTEMLSHSLQSVSGLLSDPDLEGFVKEIVGQTSGFMPRDMCALIADAGANLFPRNDTEMDKHRFEDIDASSSSKMTQEKEKVSPQIPRKEDLMNALERSKKRNASALGTPKVPNVKWEDVGGLEEVKKSILDTVQLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVSSTNPESSSQDSEADSVVVEYSDFVQVLVELSPSLSMAELQKYEKLRDQFEGTSK 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00925 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 649 930 IPR027417 -
Arst6g00925 936 Pfam ATPase family associated with various cellular activities (AAA) 378 528 IPR003959 GO:0005524|GO:0016887
Arst6g00925 936 Pfam ATPase family associated with various cellular activities (AAA) 690 822 IPR003959 GO:0005524|GO:0016887
Arst6g00925 936 CDD RecA-like_PEX6_r2 662 821 IPR047533 -
Arst6g00925 936 FunFam Peroxisomal biogenesis factor 6 648 837 - -
Arst6g00925 936 SMART AAA_5 686 826 IPR003593 GO:0016887
Arst6g00925 936 SMART AAA_5 374 533 IPR003593 GO:0016887
Arst6g00925 936 FunFam Peroxisome biogenesis protein 6 347 530 - -
Arst6g00925 936 ProSitePatterns AAA-protein family signature. 793 811 IPR003960 GO:0005524|GO:0016887
Arst6g00925 936 Gene3D - 353 551 IPR027417 -
Arst6g00925 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 590 IPR027417 -
Arst6g00925 936 PANTHER AAA-FAMILY ATPASE 66 933 - -
Arst6g00925 936 FunFam Peroxisome biogenesis protein 6 824 910 - -
Arst6g00925 936 Gene3D - 824 910 - -
Arst6g00925 936 Gene3D - 648 925 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00925 Arst-Chr6 8323413 8329344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00925 656 889 Calmodulin-binding Proteins AT3G56690 38.298 2.50e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00925 K13339 - gmx:100820183 1425.61