Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00917 ATGGACATGCCCACACCTAAACCTACCGCCAATTATCAGATCATCGCAGCACAACTCATTCGATTCGATTTCATTGGGTTTTGGTGGATGATGACGAAGAGGAAAAGCCAGAGGATTGGGAAGAAGGAGAGGAGCAAGTTCACGATGAAGAAGGGTACTCTTTCAACCACTTCCCATCTTCAGCTTCAGCTAGGTCAAGTTTCTCTCTTTCCACTCCTTCATCCTCCATCTTCTTCTTCTGCTTCCGCTCCTTCTTCCCGCTTCCAGAGCCTTCTAGATGCTGAATCTCACCGCCCAAACCCTCCCGCGGTCAACGATAACAACAACGCCTCCGACGACAGAGACTGTATTCTTAGCCAGGACTTCTTTTGCACTCCGGATTATATTACGCCGGATAATCAGAATTTCAACGGCTTGGATTTCAATATGGAGAATACCCCTTGCCCTAAATCACCGGAGAAGCTCAACACTACAAAAAGCAAGAGGTGCCGATTGGATGCTATCTCAGTTAATCCTCTCAGCCCAAACTTTTCTGGTGACCATCAACAAGTTGTTGAACTTGGAAAGGACTCTGTTGGGGAGGAAGTAGCTGCTGAGAAAACAGTAGCAGCTGATAAACCAAAGGCCCAAAATTATGTGTCACATTCTGCAGTTGCATTGCGCTGCAGGGTTATGCCTCCTCCCTGCATCCAGAATCCATATTTGAAAGATGTTTCACAAAAGGAGACAGACCCCTTTGGAAACCAAAGGATAAAATGTGCAGGTCTCTTCCCTGGAATAACTGGTGATGATGGTCTTTCACGCTATCGCACTGATTTTCATGAGATTGAGCAAATTGGTAGAGGGCACTTTAGTAGTGTTTTCAAAGTATTAAAACGAATAGATGGGTGCCTTTATGCTGTGAAACGCAGTGCCAGACAGTTACGACTGGAAACAGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCATTGGCTGCATTAGGTTCTCATGCAAACATAGTGGGATACTACTCTTCATGGTTTGAAAATGAACAGCTGTATATTCAGATGGAGCTTTGTGATCACAGCTTATCCATAAACAAATGCTCTTCATCATTTACAGAAGGACAAGTGTTAGAGGCTCTATATCAGATTGCCAATGCACTGCGGTTTATACACGAGAAGGGAATAGCTCATTTAGATGTCAAGCCTGATAATATTTATGTCAAAAATGGTGTATATAAACTTGGTGATTTTGGATGTGCAACTCTCCTTGACAATAGCCTCCTGGTTGAGGAGGGAGATGCACGTTATATGCCTCAGGAAATCCTCAATGATAATTATGATCACCTTGACAAAGTTGATATCTTTTCTTTGGGAGCTTCTGTGTACGAGTTCATTCGGCGATTGCCTTTGCCAGAATCAGGATGCCAATTTTTTAATCTTAAAGAGGGAAAGCTACCACTTTTGCCTGGCCACTCATTGCAATTCCAAAACTTGCTCAAGGCCATGATGGACCCTGATCCAGTTAAGCGTCCTTCTGCTCGGGAGTTGATAGAGAATCCAATTTTCGACAAGGTCATTAGAACAGCCAAAATTTGA 1581 0.4358 MDMPTPKPTANYQIIAAQLIRFDFIGFWWMMTKRKSQRIGKKERSKFTMKKGTLSTTSHLQLQLGQVSLFPLLHPPSSSSASAPSSRFQSLLDAESHRPNPPAVNDNNNASDDRDCILSQDFFCTPDYITPDNQNFNGLDFNMENTPCPKSPEKLNTTKSKRCRLDAISVNPLSPNFSGDHQQVVELGKDSVGEEVAAEKTVAADKPKAQNYVSHSAVALRCRVMPPPCIQNPYLKDVSQKETDPFGNQRIKCAGLFPGITGDDGLSRYRTDFHEIEQIGRGHFSSVFKVLKRIDGCLYAVKRSARQLRLETERRKALMEVQALAALGSHANIVGYYSSWFENEQLYIQMELCDHSLSINKCSSSFTEGQVLEALYQIANALRFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDNSLLVEEGDARYMPQEILNDNYDHLDKVDIFSLGASVYEFIRRLPLPESGCQFFNLKEGKLPLLPGHSLQFQNLLKAMMDPDPVKRPSARELIENPIFDKVIRTAKI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00917 526 SUPERFAMILY Protein kinase-like (PK-like) 267 519 IPR011009 -
Arst6g00917 526 ProSitePatterns Protein kinases ATP-binding region signature. 279 302 IPR017441 GO:0005524
Arst6g00917 526 ProSiteProfiles Protein kinase domain profile. 273 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00917 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Arst6g00917 526 FunFam Wee1-like protein kinase 352 521 - -
Arst6g00917 526 FunFam WEE protein kinase 263 351 - -
Arst6g00917 526 SMART serkin_6 273 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00917 526 MobiDBLite consensus disorder prediction 75 93 - -
Arst6g00917 526 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 89 516 - -
Arst6g00917 526 Gene3D Transferase(Phosphotransferase) domain 1 352 522 - -
Arst6g00917 526 Pfam Protein kinase domain 273 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00917 526 Gene3D Phosphorylase Kinase; domain 1 263 351 - -
Arst6g00917 526 MobiDBLite consensus disorder prediction 75 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00917 Arst-Chr6 8227358 8230833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00917 30 520 Core Cell Cycle Gene Families AT1G02970 60.685 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Arst6g00917 Pkinase 9.2e-49 CL0016