Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00900 ATGTCATCCGCAACAACTGCACCATGGATCACTTCTCTCTCGTGTGCATCTCCAACCTCAGGAGACACTCTACCTCAATGGCTGAGATTCATTTTCCTGTCTCCATGTCCTCAGAGAGCTATGCTATCTGCCATTGATGTCTTGCTCTTGCTCATTCTCTTTGTGTTTGCCGTGATCAAGCTCTATTCTAGGTTCACCTCCAATGGCTCCTCCTCCACCAATGGACTTAACAAGCCACTTATCAGAAATAATAACAGACCCTTTGTCTCAGTAACCATATGGTTTAAGCTAACTTTAGCTGCAACTTCTGTTCTTGCCTTATTGTACACCATTGCTTGTGTTCTGGTATTTACCAGTTCAACTGAGATTCCATGGAAGCAAGTTGATGGAATGTTTTGGTTAGTCCAGGCCATAACACAATTAATACTTGCAGTGTTAATCATCCATGAGAAAAGATTCCAAGCTGTAACTCATCCTCTTACACTTCGATTTTATTGGATTGTGTATTTTATTATTACTTGCTTGTTTGTGGCTTCTGGGATTATACGTTTGGTCTCTGTGGATGTGGATGGAACCAAAGAGTTCATCTTCAAGGTGGATGACATAGCTTCTTTCATATCCCTACCTCTGTCACTGTTTCTTCTCTTTGTCGCAGTCAAAGGGTCCACTGGCATTATGTCCAATGAGGAAATACAACCACTTATTGATGAGGAAACTAAGCTATATGATGATACTCTGGAAAAATCTGGAGTCACTGGATTCGCTTCGGCTTCTATAGTATCCAAGGCATTTTGGATTTGGATAAACCCCTTGTTGAGTAAAGGGTACAAGTCCCCATTGAAGATTGATGAGATTCCAACCCTTTCACCTGATCATAGAGCTGAGAGGATGTCTGTTATCTTTGAATCAAAATGGCCAAAATCAAATGAAAGGACGAAGCATCCGGTTCGAGTCACATTGATCCGGTGCTTCTGGAGGGAATTGGCCTTCACCGCATTCCTTGCTGTTGTTAGGGTCTGTGTCATGTTTGTGGGGCCAATTCTCATACAAAGTTTTGTTGATTTCACTTCAGGGAAGAGAAGTTCTGTTTATGAAGGGTACTACCTAGTGTTGATCCTCCTTGTTGCTAAGTTTGTGGAAGTTTTAACCACTCATCATTTCAACTTCAATTCTCAGAAGCTTGGGATGCTTATCCGATGCACACTCATCACTTCTCTGTACAAGAAGGGCCTCAAGCTTTCTTGCTCCTCAAGGCAAGATCATGGTGTTGGGACTATTGTGAATTACATGGCTGTTGATGCTCAACAACTCTCTGATATGATGCTTCAGTTGCATTCCGTGTGGGTGACTCCGCTTCAAGTCACTGTTGCCTTGTTTCTACTTTATAATGCTTTGGGTGCCTCTGTAGTTACGGCCTTACTTGGCCTTCTTGGTGTTCTTGCATTTGTTGTGGTTGGCACAAAGAGAAACAACCGTTTTCAATTCAATGTGATGAAGAATCGTGACTCGAGGATGAAAGCAATGAATGAGATGCTTAACTACATGCGTGTGATCAAGTTCCAGGCTTGGGAGGAGCATTTCAATGGGAGAATCATGGGGTTCCGTGAGTCAGAGTTTGAGTGGTTGTCCAAGTTCATGTTCTCGATTTGTGGCAACATTGTTGTGATGTGGAGCACACCATTGCTGATATCAACTCTGACATTTGGCACAGCTATTTTGCTTGGAGTTCGCCTTGATGCAGCCACAGTTTTCACCACAACAACAATATTTAAGATCTTGCAGGAACCAATTAGGACGTTTCCACAGTCCATGATATCTCTTTCACAAGCAATGATATCACTGGGAAGGCTAGACAGATACATGTTGAGCAGGGAATTGTCGAATGATTCGGTCGAAAGAGAGGAAGGCTGCAGTGGACACACTGCTGTGGAGGTCTGTGATGGGACCTTCAGCTGGGATGATGACAGCCTACAGCATGACTTGAAGGATATCAATTTGGAGATCAGAAAAGGGGATCTTACAGCAATTGTTGGGACTGTAGGGTCTGGAAAGTCATCTCTCTTGGCATCAATTCTTGGTGAAATGCGCAAAGTTTCTGGAAAGGTTCGGGTTTGTGGAAGTACTGCTTATGTTGCACAGACATCTTGGATTCAGAATGGGACCATTGAGGAAAACATTCTCTTTGGTATGCCAATGAACAGACAAAAGTACAATGAAGTCATCAGGGTTTGTTGCTTGGAGAAAGATTTGGAAATGATGGAGTTTGGGGATCAGACTGAGATCGGAGAGCGTGGCATCAACCTCAGTGGTGGACAGAAGCAGCGCATACAACTTGCCAGGGCTGTGTACCAAGACTGTGATATCTATCTTCTTGATGATGTCTTTAGTGCTGTTGATGCTCACACTGGTTCTGAAATATTTAAGGAATGTGTGAGGGGGGCTTTAAAAGGCAAGACTGTAGTCCTTGTAACACACCAAGTAGATTTTTTACATAATGTGGATCTTATATTGGTCATGAAAGATGGAATGATAGTCCAAGCAGGAAAGTATGATGATATACTTGATTCTGGACTGGATTTCAAAGCTTTGGTTGTTGCACACGAAACCTCCATGGAAATAGTAGAGCAAGGCTCGACTACTGTCGGCGAAAGCCTGAATAGTCCATCGAAATCTCCAAGAACACCTTCTGGTCACAAAGGAGCCAATGGTGAGAGCAATTCTCTTGATCAGCCAAAGTCTGGCAATGGAAGTTCTAAACTGATAAAAGAAGAGGAAAGGGAAACAGGCAAAGTTAGCTTGCATATGTACAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTACAGGAATATTGATTCTTTCTTTGCTATGGCAAGCATCTTTGATGGCAAGTGATTATTGGCTAGCATATGAAACATCAGAAGAACGTGCTCAAGTGTTCAACCCTTCTCTGTTTATTTCCATCTATGCAATCATCTCTCTTGTTTCAGTTTTTTTGGTAGTTATAAGATCCTACTCATACACATTCATGGGGCTAAAGACGGCACAACTTTTCTTCACTCAAATTCTTCACAGCATCCTTCATGCACCCATGTCTTTCTTTGACACTACACCATCAGGAAGAATTCTTAGTAGGGCATCCACTGATCAGACCAATGTTGATGTTCTTCTTCCCTTGTTTCTTGGAATTGTCATTGCCATGTACATTACAGTGCTCAGCATCTTCATCATCACCTGTCAAAATTCATGGCCAACAGCATTCTTGTTGATTCCTCTTGTTTGGTTGAACATATGGTACCGGGGTTATTTTCTTGCTTCATCTCGCGAGTTAACTCGACTGGATCAAATTACCAAAGCACCTGTTATTCATCACTTCTCGGAAAGCATTTCAGGGGTCATGACAGTCCGAGCATTCAGAAAGCAGAAGAGATTTACTGAAGAGAATGTTAAAAGGGTGAATGCTAATTTAAGAATGGATTTCCACAACTATAGTTCCAATGAGTGGTTGGGATTCCGCTTAGAATTGCTTGGAAGCTTGGTTTTCTGCATTTCAGCCATGTTCATGATCCTCTTACCAAGCAATATCATAAAGCCAGAAAATGTTGGTTTATCTCTTTCTTATGGTTTGTCATTGAATGCTGTCTTGTTCTGGGCTGTGTACATGAGCTGCTTCATTGAGAACAAAATGGTATCTGTTGAGAGGATAAAACAGTTTACAAATATTCCATCAGAACCGGCATGGATTATTAAGGATCGTTTGCCTCCTTCAAATTGGCCAGGTCAAGGCAATGTTGATATTAAAGACTTGCAGGTCCGGTATCGTCCAAACACTCCTCTAGTTCTCAAGGGCATTACTTTAAGCATTTATGGAGGAGAAAAGATTGGTGTTGTAGGCCGAACTGGAAGTGGAAAATCAACTCTGATTCAAGTTTTCTTCAGGCTGGTGGAACCTTCAGGAGGCAAAATAATTATTGATGGCATTGACATATCAGTGTTGGGGCTTCATGATCTTAGATCTCGCTTTGGTATCATCCCTCAGGAGCCTGTCCTTTTCGAAGGAACTGTCAGAAGCAATATTGATCCAACTGGACAGTACACAGATGAAGATATATGGAAGAGTTTGGAAAGGTGTCAACTAAAAGAGGCAGTGTCTGCTAAGCCTGAAAAGCTTGACTCTTTAGTGGTAGATAATGGAGAGAATTGGAGTGTGGGGCAGAGGCAGTTGCTTTGTTTGGGGCGGGTTATGCTTAAGCAAAGCCGGCTCTTGTTTATGGACGAAGCAACGGCTTCTGTTGATTCGCAAACTGATGGTGTGATTCAGAAGATCATAAGAGAGGATTTTGCAGCATGTACCATCATCAGCATTGCTCACAGAATACCTACAGTCATGGACTGTGATAGAGTTTTAGTTGTAGATGCAGGGAGAGCAAAAGAATTTGATAAGCCTTCAAACTTGCTTCAAAGGCCATCTCTGTTTGGAGCATTGGTTCATGAGTATGCTAGCCGTTCCACAGGACTATAA 4527 0.4237 MSSATTAPWITSLSCASPTSGDTLPQWLRFIFLSPCPQRAMLSAIDVLLLLILFVFAVIKLYSRFTSNGSSSTNGLNKPLIRNNNRPFVSVTIWFKLTLAATSVLALLYTIACVLVFTSSTEIPWKQVDGMFWLVQAITQLILAVLIIHEKRFQAVTHPLTLRFYWIVYFIITCLFVASGIIRLVSVDVDGTKEFIFKVDDIASFISLPLSLFLLFVAVKGSTGIMSNEEIQPLIDEETKLYDDTLEKSGVTGFASASIVSKAFWIWINPLLSKGYKSPLKIDEIPTLSPDHRAERMSVIFESKWPKSNERTKHPVRVTLIRCFWRELAFTAFLAVVRVCVMFVGPILIQSFVDFTSGKRSSVYEGYYLVLILLVAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLKLSCSSRQDHGVGTIVNYMAVDAQQLSDMMLQLHSVWVTPLQVTVALFLLYNALGASVVTALLGLLGVLAFVVVGTKRNNRFQFNVMKNRDSRMKAMNEMLNYMRVIKFQAWEEHFNGRIMGFRESEFEWLSKFMFSICGNIVVMWSTPLLISTLTFGTAILLGVRLDAATVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRYMLSRELSNDSVEREEGCSGHTAVEVCDGTFSWDDDSLQHDLKDINLEIRKGDLTAIVGTVGSGKSSLLASILGEMRKVSGKVRVCGSTAYVAQTSWIQNGTIEENILFGMPMNRQKYNEVIRVCCLEKDLEMMEFGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTVVLVTHQVDFLHNVDLILVMKDGMIVQAGKYDDILDSGLDFKALVVAHETSMEIVEQGSTTVGESLNSPSKSPRTPSGHKGANGESNSLDQPKSGNGSSKLIKEEERETGKVSLHMYKLYCTEAFGWWGITGILILSLLWQASLMASDYWLAYETSEERAQVFNPSLFISIYAIISLVSVFLVVIRSYSYTFMGLKTAQLFFTQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDVLLPLFLGIVIAMYITVLSIFIITCQNSWPTAFLLIPLVWLNIWYRGYFLASSRELTRLDQITKAPVIHHFSESISGVMTVRAFRKQKRFTEENVKRVNANLRMDFHNYSSNEWLGFRLELLGSLVFCISAMFMILLPSNIIKPENVGLSLSYGLSLNAVLFWAVYMSCFIENKMVSVERIKQFTNIPSEPAWIIKDRLPPSNWPGQGNVDIKDLQVRYRPNTPLVLKGITLSIYGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGKIIIDGIDISVLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEDIWKSLERCQLKEAVSAKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDGVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVVDAGRAKEFDKPSNLLQRPSLFGALVHEYASRSTGL 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00900 1508 SUPERFAMILY ABC transporter transmembrane region 320 621 IPR036640 GO:0005524|GO:0016020
Arst6g00900 1508 SMART AAA_5 670 851 IPR003593 GO:0016887
Arst6g00900 1508 SMART AAA_5 1292 1476 IPR003593 GO:0016887
Arst6g00900 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 863 IPR027417 -
Arst6g00900 1508 FunFam ABC transporter C family member 3 1249 1500 - -
Arst6g00900 1508 FunFam ABC transporter C family member 10 312 625 - -
Arst6g00900 1508 Coils Coil 1137 1157 - -
Arst6g00900 1508 FunFam ABC transporter C family member 5 912 1247 - -
Arst6g00900 1508 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1259 1499 IPR027417 -
Arst6g00900 1508 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 951 1229 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g00900 1508 Gene3D ABC transporter type 1, transmembrane domain 308 621 IPR036640 GO:0005524|GO:0016020
Arst6g00900 1508 Gene3D ABC transporter type 1, transmembrane domain 914 1247 IPR036640 GO:0005524|GO:0016020
Arst6g00900 1508 CDD ABCC_MRP_domain1 643 842 - -
Arst6g00900 1508 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1266 1500 IPR003439 GO:0005524
Arst6g00900 1508 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 329 609 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g00900 1508 MobiDBLite consensus disorder prediction 877 917 - -
Arst6g00900 1508 Pfam ABC transporter 661 794 IPR003439 GO:0005524
Arst6g00900 1508 Pfam ABC transporter 1283 1431 IPR003439 GO:0005524
Arst6g00900 1508 Pfam ABC transporter transmembrane region 982 1204 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g00900 1508 Pfam ABC transporter transmembrane region 330 596 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst6g00900 1508 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524|GO:0016887
Arst6g00900 1508 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 255 1500 - -
Arst6g00900 1508 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 255 1500 - -
Arst6g00900 1508 Gene3D - 622 885 IPR027417 -
Arst6g00900 1508 CDD ABCC_MRP_domain2 1264 1484 - -
Arst6g00900 1508 MobiDBLite consensus disorder prediction 877 921 - -
Arst6g00900 1508 SUPERFAMILY ABC transporter transmembrane region 946 1246 IPR036640 GO:0005524|GO:0016020
Arst6g00900 1508 CDD ABC_6TM_ABCC_D2 949 1241 IPR044726 GO:0140359
Arst6g00900 1508 FunFam ABC transporter C family member 4 626 884 - -
Arst6g00900 1508 Gene3D - 1250 1498 IPR027417 -
Arst6g00900 1508 CDD ABC_6TM_ABCC_D1 330 617 IPR044746 GO:0140359
Arst6g00900 1508 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 866 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00900 Arst-Chr6 8103932 8110546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00900 643 859 Calmodulin-binding Proteins AT2G36910 31.760 6.38e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00900 - K05666 gmx:100793361 2465.26