Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00889 ATGGTCATAATATCACGCCTTATGTTACTCCATGCATTATTGTTATTGTTCCTTTCATCATTCCTAGCAAGCAGTGTCCAAATGGTGTTTGCAAAAGGGAACAAAAATGGTTATGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAGAGTTGTGTGTTCATTCACTAGCACAATTCTCCAACACTGCGGGAACAAGTCCTAGCAAATGGGCACGTGCTGGGGTATCAGTGACAATAGGCGAGGTAAAGAAAGTTCGAGCATACTTGGCACAGTTGAAAAGAAATGGAGGATTCATAGGAAGAAACAGAGCTGCACTTTCAGATTGTGCTGAGGTTTTTGATGATGCACTTGATGAACTTCATAGATCACTTGATGTGCTAAGAAAGCTTAGCAAAACCACGTTTAGCACACAAATGGGGGATCTCAATACGTGGATTAGCGCCGCCCTAACCGATGAAAACACTTGCCTTGATGGATTTTCATTTCAAGTTCAAGATAATAATAATAATAATAATCATAACAATAATAAGAAGAAGCAGATCAAGTTGCTGCAGAGGAGGGTCCAGAATGTTTCTTACATAACCAGCAATGCTCTAGCTCTTGTTAACAAGCTTGCTACCACAGGTATTGAAAGCTTTGTTGATCAAGACAAGTCCTGA 660 0.4015 MVIISRLMLLHALLLLFLSSFLASSVQMVFAKGNKNGYVREACSVTRYQELCVHSLAQFSNTAGTSPSKWARAGVSVTIGEVKKVRAYLAQLKRNGGFIGRNRAALSDCAEVFDDALDELHRSLDVLRKLSKTTFSTQMGDLNTWISAALTDENTCLDGFSFQVQDNNNNNNHNNNKKKQIKLLQRRVQNVSYITSNALALVNKLATTGIESFVDQDKS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00889 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 207 IPR035513 -
Arst6g00889 219 CDD PMEI-like_3 42 207 - -
Arst6g00889 219 FunFam Pectinesterase inhibitor 3 34 206 - -
Arst6g00889 219 SMART PMEI_2 34 201 IPR006501 GO:0004857
Arst6g00889 219 Pfam Plant invertase/pectin methylesterase inhibitor 39 201 IPR006501 GO:0004857
Arst6g00889 219 NCBIfam pectinesterase inhibitor domain 8 205 IPR006501 GO:0004857
Arst6g00889 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 205 IPR035513 -
Arst6g00889 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00889 Arst-Chr6 8051414 8052451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00889 39 218 Carbohydrate Esterase AT3G14310 34.615 1.72e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00889 - - adu:107492431 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00889 6 8051414 8052451 Arst6g00889 6 8051414 8052451 ECH