Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00878 ATGGGCATCGATTTGAAAGCAGGAGGTAAGTCGAAGAAGACCAAGCGTACAGCCCCCAAATCCAATGATATCTATCTCAAGCTCCTCGTCAAGCTATACCGTTTCCTTGTTCGGAGGACTGGTAGTAACTTCAACGCCGTCATCCTCAAGCGTCTTTTCATGAGCAAAGTCAACAAGCCACCGCTATCTCTCTCCCGCTTGATCCGTTACATGAAGGGAAAGGAGGGTAAGATAGCTGTAGTTGTGGGAGCTGTGACAGATGATATTAGGGTGTACGAAGTGCCTGCATTGAAGGTAACTGCCCTGAGATTCACTGAAACTGCCAGAGCTCGGATTGAGAAGGCTGGTGGCGAGTGTCTTACCTTTGATCAGCTTGCTCTTAGAGCTCCTCTTGGCCAGAACACAGTTCTTCTTAGAGGCCCTAAGAATGCCCGCGAGGCTGTCAAGCACTTTGGACCAGCACCTGGTGTGCCCCATAGTCACACCAAGCCCTACGTTCGTGCAAAGGGACGGAAATTTGAGCGTGCTAGAGGAAGAAGGAATAGCAGAGGCTTCAGAGTTTGA 564 0.5 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIRYMKGKEGKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00878 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Arst6g00878 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Arst6g00878 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Arst6g00878 187 Gene3D - 1 187 - -
Arst6g00878 187 FunFam 60S ribosomal protein L18 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00878 Arst-Chr6 7969409 7971216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00878 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 80.645 1.05e-106 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00878 K02883 - gmx:100499789 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00878 6 7969409 7971216 Arst6g00878 6 7969409 7971216 ECH