Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00876 ATGGCATTGGACCCAGATATTGAAGAAAAGTATGTTCACAACAGCAAGGTCATGCTAGGATCTGCAATTCTTCTCGTTATACTCATCCTCGTAATCATCCTATATCGTTCTTATGCTCACTTCTGCGCACGCCGCCGCCGCCATCTCTTCCCTCACACTCTTCCAGCTTCTTCCACTTCCGCCACCGCCCCTGTTTTCAACGACCGACTGGATCCAACCATTCTCAAGTCCCTACCGACCTTTACTTTCTCCTCCGCCGTGCACCGCCCCCTGCAAGACTGCGCCGTCTGCCTTTCGGAGTTCGAAGACGGAGACAAGGGCCGTGTGCTGCCGAATTGCAGCCACGCGTTCCACTGCCAATGCATCGACGCGTGGTTCGCATCTCACTCCAACTGCCCTCTCTGCCGGTCACCGGTTAAACGGGTTACCACACCGGTTGAAGCGTGCTCGATTCCGGTTTCAGTTGAATTAGCGGTTGAAGTGGAAGCTGGTGGTTGCTCGTCGCTTCCTCCGCCGGTGATGTGCCCTAGGAAGCCGTTGAATGTGGTGGTGGAGATTCCGGAAGAGGAGAGAGGGTTGGATCATCGGATTCTTTCGCTGAAGAAGTTTTGCAGCGTGTAG 621 0.5443 MALDPDIEEKYVHNSKVMLGSAILLVILILVIILYRSYAHFCARRRRHLFPHTLPASSTSATAPVFNDRLDPTILKSLPTFTFSSAVHRPLQDCAVCLSEFEDGDKGRVLPNCSHAFHCQCIDAWFASHSNCPLCRSPVKRVTTPVEACSIPVSVELAVEVEAGGCSSLPPPVMCPRKPLNVVVEIPEEERGLDHRILSLKKFCSV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00876 206 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 140 IPR044675 -
Arst6g00876 206 FunFam E3 ubiquitin-protein ligase ATL6 58 142 - -
Arst6g00876 206 SUPERFAMILY RING/U-box 74 142 - -
Arst6g00876 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 142 IPR013083 -
Arst6g00876 206 CDD RING-H2_EL5-like 93 136 - -
Arst6g00876 206 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Arst6g00876 206 Pfam Ring finger domain 93 136 IPR001841 -
Arst6g00876 206 SMART ring_2 94 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00876 Arst-Chr6 7956836 7957895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00876 9 163 Rapid Response to Elicitors AT3G16720 38.462 1.16e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00876 - - gmx:100800433 235.343