Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00863 ATGGTGTCTCTGAAACTGCAGAAGCGCCTTGCGGCTAGCGTCCTCAAGTGTGGCAGAGGGAAGGTTTGGCTTGACCCCAATGAAGTCAATGAAATCTCCATGGCCAATTCCCGTCAAAACATAAGGAAGCTGGTTAAGGATGGTTTCATTATCAGGAAACCCACAAAGATTCACTCCCGTTCACGTGCCCGTAGGATGAAGGAAGCCAAGAGGAAAGGACGTCACTCTGGCTATGGTAAGCGTAAGGGTACCAGGGAGGCAAGGCTTCCAACCAAGGTTCTTTGGATGAGGAGAATGCGTGTTCTCAGACGCCTGCTCCGCAAGTACAGGGAATCCAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTTAAGGGTAATGTTTTCAAGAACAAGAGAGTGCTGATGGAGAGCATTCACAAGTCCAAGGCTGAGAAGGCAAGAGAGAAGACCCTGTCTGACCAGTTTGAGGCCAAGCGTGCTAAGAACAAGGCCAGCAGAGAAAGGAAGATTGCTCGTAGGGAGGAGCGATTGGCCCAGGGTCCTGGAGAGAAGCCTGCACCCACTCCTGCACCTGCTACAGCATCACAGCCTGCCCAAGCAACAAAGAAATCCAAGAAGTGA 633 0.5055 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREERLAQGPGEKPAPTPAPATASQPAQATKKSKK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00863 210 PANTHER 60S RIBOSOMAL PROTEIN L19 1 188 IPR039547 GO:0003723|GO:0003735|GO:0022625
Arst6g00863 210 Gene3D - 57 188 - -
Arst6g00863 210 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Arst6g00863 210 MobiDBLite consensus disorder prediction 57 85 - -
Arst6g00863 210 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Arst6g00863 210 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Arst6g00863 210 FunFam Ribosomal protein L19 57 190 - -
Arst6g00863 210 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Arst6g00863 210 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Arst6g00863 210 FunFam Ribosomal protein L19 1 56 - -
Arst6g00863 210 MobiDBLite consensus disorder prediction 149 210 - -
Arst6g00863 210 MobiDBLite consensus disorder prediction 149 184 - -
Arst6g00863 210 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Arst6g00863 210 MobiDBLite consensus disorder prediction 57 79 - -
Arst6g00863 210 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00863 Arst-Chr6 7802457 7804180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00863 1 210 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 85.714 3.35e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00863 K02885 - gmx:100527501 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00863 6 7802457 7804180 Arst6g00863 6 7802457 7804180 ECH