Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00858 ATGTCTAGTGTGGTGGAGTCTAAGAGTGATGGTTGTTATTATTCGGTGCTTGGGGTTCGCAAGCACTCAACCGATCACGAAATTCGTTGCGCTTATCGTAAGATGGCTCTGAAATGGCACCCTGATCGGTGGATCAAAGAACCAAAGCTTGCGGTGGAAGCAAAGAAACAGTTTCAGCATATTCAAGAGGCTTATTCAGTTTTGTCTAATAAAGGGAAGAGAATGATATATGACGCGGGAATGTTTGGTTTTATTGGAGAAGACGATGATGAGGTTTGTTATGGATTTGTTGATTTCATGCAAGAAATGGTCTTGACAATCAGTGGCGGAACCAGAAATTTCATAAGAGGGGGGCCAATTAAATATAAAATATAA 375 0.408 MSSVVESKSDGCYYSVLGVRKHSTDHEIRCAYRKMALKWHPDRWIKEPKLAVEAKKQFQHIQEAYSVLSNKGKRMIYDAGMFGFIGEDDDEVCYGFVDFMQEMVLTISGGTRNFIRGGPIKYKI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00858 124 PRINTS DnaJ domain signature 32 47 IPR001623 -
Arst6g00858 124 PRINTS DnaJ domain signature 53 73 IPR001623 -
Arst6g00858 124 PRINTS DnaJ domain signature 14 32 IPR001623 -
Arst6g00858 124 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Arst6g00858 124 PANTHER PUTATIVE, EXPRESSED-RELATED 7 108 - -
Arst6g00858 124 Gene3D DnaJ domain 1 84 IPR036869 -
Arst6g00858 124 SUPERFAMILY Chaperone J-domain 11 103 IPR036869 -
Arst6g00858 124 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Arst6g00858 124 SMART dnaj_3 11 73 IPR001623 -
Arst6g00858 124 Pfam DnaJ domain 13 78 IPR001623 -
Arst6g00858 124 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00858 Arst-Chr6 7764692 7765882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00858 12 79 C2H2 Transcription Factor Family AT1G74250 46.377 1.31e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00858 - - adu:107492457 247.669