Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00854 ATGTCCTCCGATACTCACGCCGCCACACACCCCGCCACTCACGCCGCCCCTAATATCAACCCCAGGGGTCTTCTCTGCAATGCTGCAGCTGGCGCCGCCGCCGGTGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTAATCAAAACTAGGTTTCAGGTTCATGGGGTAGCGCAACTCCATAATGGACGTGTTAAAGGCAGCATCATAGTTGGTAGCTTGGAACAAATATTTCACAAGGAGGGATTGCGTGGCATGTACCGTGGGTTGTCTCCCACTGTGCTAGCTTTACTGCCAAACTGGGCTGTATATTTTACCATGTATGAACAGCTCAAGAGCCTTCTTCAGCCTGAGGATTGCCATAATCTTTCAGTTGGAGCTAATATGATGGCCGCTTCTGGTGCTGGAGCTGCAACAACAATGTTCACAAATCCACTTTGGGTTGTCAAGACTAGACTCCAAACTCAGGGAATGAGATCTGGTGTTGTGCCATATAGGAGCACTCTTTCTGCATTGAGGAGAATTGCACACGAGGAGGGTATTCGAGGGCTGTACAGTGGACTTGTACCTGCGCTGGCTGGTATCAGTCATGTAGCCATCCAGTTTCCAACATACGAGAAAATAAAATGTTACTTGGCAACTCAAGGTGACACATCAATGGATAAACTTGGTGCACGTGATGTTGCAATTGCCTCATCAGTCTCCAAAATTTTTGCATCAACATTGACATATCCCCATGAGGTTGTACGTTCCAGACTGCAAGAGCAAGGGCACCATTCTGAGAAAAGGTACTCGGGTGTGATTGATTGCGTTCGGAAGGTTTTTCAGCAAGAGGGCATACCTGGGTTTTACCGTGGGTGTGCCACCAACCTTCTGAGGACAACACCAGCTGCTGTAATCACATTCACAAGCTTTGAAATGATACATCGTTTTCTTGTTTCGGTTTTTCCGTCTGATCCGCAGCCTCAGATTTTGTGA 978 0.4755 MSSDTHAATHPATHAAPNINPRGLLCNAAAGAAAGVIAATFVCPLDVIKTRFQVHGVAQLHNGRVKGSIIVGSLEQIFHKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSLLQPEDCHNLSVGANMMAASGAGAATTMFTNPLWVVKTRLQTQGMRSGVVPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKCYLATQGDTSMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVRKVFQQEGIPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSVFPSDPQPQIL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00854 325 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 10 120 - -
Arst6g00854 325 Gene3D Mitochondrial carrier domain 5 118 IPR023395 -
Arst6g00854 325 Gene3D Mitochondrial carrier domain 119 315 IPR023395 -
Arst6g00854 325 Pfam Mitochondrial carrier protein 123 213 IPR018108 -
Arst6g00854 325 Pfam Mitochondrial carrier protein 229 313 IPR018108 -
Arst6g00854 325 Pfam Mitochondrial carrier protein 24 116 IPR018108 -
Arst6g00854 325 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 25 314 IPR044712 GO:0006862|GO:0055085
Arst6g00854 325 SUPERFAMILY Mitochondrial carrier 24 307 IPR023395 -
Arst6g00854 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 311 IPR018108 -
Arst6g00854 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 211 IPR018108 -
Arst6g00854 325 FunFam NAD+ transporter 121 316 - -
Arst6g00854 325 PRINTS Mitochondrial carrier protein signature 89 109 IPR002067 GO:0055085
Arst6g00854 325 PRINTS Mitochondrial carrier protein signature 27 40 IPR002067 GO:0055085
Arst6g00854 325 PRINTS Mitochondrial carrier protein signature 232 254 IPR002067 GO:0055085
Arst6g00854 325 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Arst6g00854 325 PRINTS Mitochondrial carrier protein signature 40 54 IPR002067 GO:0055085
Arst6g00854 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 114 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00854 Arst-Chr6 7730964 7734658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00854 20 325 Chloroplast and Mitochondria Gene Families AT2G47490 79.085 1.23e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00854 K15115 - gmx:100500213 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00854 6 7730964 7734658 Arst6g00854 6 7730964 7734658 ECH