Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00853 ATGTCCTCCGATACTCACGCCGCCACACACCCCGCCACTCACGCCGCCCCTAATATCAACCCCAGGGGTCTTCTCTGCAATGCTGCAGCTGGCGCCGCCGCCGGTGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTAATCAAAACTAGGTTTCAGGTTCATGGGGTAGCGCAACTCCATAATGGACGTGTTAAAGCAGGCAGCATCATAGTTGGTAGCTTGGAACAAATATTTCACAAGGAGGGATTGCGTGGCATGTACCGTGGGTTGTCTCCCACTGTGCTAGCTTTACTGCCAAACTGGGCTGTATATTTTACCATGTATGAACAGCTCAAGAGCCTTCTTCAGCCTGAGGATTGCCATAATCTTTCAGTTGGAGCTAATATGATGGCCGCTTCTGGTGCTGGAGCTGCAACAACAATGTTCACAAATCCACTTTGGGTTGTCAAGACTAGACTCCAAACTCAGGGAATGAGATCTGGTGTTGTGCCATATAGGAGCACTCTTTCTGCATTGAGGAGAATTGCACACGAGGAGGGTATTCGAGGGCTGTACAGTGGACTTGTACCTGCGCTGGCTGGTATCAGTCATGTAGCCATCCAGTTTCCAACATACGAGAAAATAAAATGTTACTTGGCAACTCAAGGTGACACATCAATGGATAAACTTGGTGCACGTGATGTTGCAATTGCCTCATCAGTCTCCAAAATTTTTGCATCAACATTGACATATCCCCATGAGGTTGTACGTTCCAGACTGCAAGAGCAAGGGCACCATTCTGAGAAAAGGTACTCGGGTGTGATTGATTGCGTTCGGAAGGTTTTTCAGCAAGAGGGCATACCTGGGTTTTACCGTGGGTGTGCCACCAACCTTCTGAGGACAACACCAGCTGCTGTAATCACATTCACAAGCTTTGAAATGATACATCGTTTTCTTGTTTCGGTTTTTCCGTCTGATCCGCAGCCTCAGATTTTGTGA 981 0.476 MSSDTHAATHPATHAAPNINPRGLLCNAAAGAAAGVIAATFVCPLDVIKTRFQVHGVAQLHNGRVKAGSIIVGSLEQIFHKEGLRGMYRGLSPTVLALLPNWAVYFTMYEQLKSLLQPEDCHNLSVGANMMAASGAGAATTMFTNPLWVVKTRLQTQGMRSGVVPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKCYLATQGDTSMDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVRKVFQQEGIPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSVFPSDPQPQIL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00853 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 115 IPR018108 -
Arst6g00853 326 PRINTS Mitochondrial carrier protein signature 27 40 IPR002067 GO:0055085
Arst6g00853 326 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Arst6g00853 326 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Arst6g00853 326 PRINTS Mitochondrial carrier protein signature 139 157 IPR002067 GO:0055085
Arst6g00853 326 PRINTS Mitochondrial carrier protein signature 40 54 IPR002067 GO:0055085
Arst6g00853 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 312 IPR018108 -
Arst6g00853 326 FunFam NAD+ transporter 122 317 - -
Arst6g00853 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 212 IPR018108 -
Arst6g00853 326 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 10 121 - -
Arst6g00853 326 Pfam Mitochondrial carrier protein 24 117 IPR018108 -
Arst6g00853 326 Pfam Mitochondrial carrier protein 230 314 IPR018108 -
Arst6g00853 326 Pfam Mitochondrial carrier protein 124 214 IPR018108 -
Arst6g00853 326 Gene3D Mitochondrial carrier domain 5 120 IPR023395 -
Arst6g00853 326 Gene3D Mitochondrial carrier domain 121 316 IPR023395 -
Arst6g00853 326 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 25 315 IPR044712 GO:0006862|GO:0055085
Arst6g00853 326 SUPERFAMILY Mitochondrial carrier 24 308 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00853 Arst-Chr6 7730963 7734658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00853 20 326 Chloroplast and Mitochondria Gene Families AT2G47490 78.827 8.18e-166 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00853 K15115 - gmx:100500213 539.265