Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00842 ATGGAAGTTCAAGTTGGAGCAGTATCAAACAGAAGCTGTAACGATTGCCACACAACCACCACACCTCTATGGAGGGCTGGTCCAGATGGCCCTAGGTCTCTTTGCAATGCATGTGGGCTAAGGTACAGGAAGAGGAGGAAAGCCCTGGATAAAGGGGGAGCAAAGAAAAGCAGGAAGAGGAATAATAGAGCAACAAGTGAGCATGATGATGAAGTGGATTTTGGTTGCAATTTGGAGCCTTATACATTACATGGAAGAAGTCAATTCAAGTTAAAGGAAGAAGAAGAGGCTGCTATATTGTTGATGGCCCTTTCTTGTGCTTATTAG 327 0.4434 MEVQVGAVSNRSCNDCHTTTTPLWRAGPDGPRSLCNACGLRYRKRRKALDKGGAKKSRKRNNRATSEHDDEVDFGCNLEPYTLHGRSQFKLKEEEEAAILLMALSCAY 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00842 108 SMART GATA_3 7 66 IPR000679 GO:0006355|GO:0043565
Arst6g00842 108 ProSiteProfiles GATA-type zinc finger domain profile. 7 43 IPR000679 GO:0006355|GO:0043565
Arst6g00842 108 ProSitePatterns GATA-type zinc finger domain. 13 38 IPR000679 GO:0006355|GO:0043565
Arst6g00842 108 CDD ZnF_GATA 12 60 IPR000679 GO:0006355|GO:0043565
Arst6g00842 108 PANTHER OS01G0976800 PROTEIN 9 107 - -
Arst6g00842 108 MobiDBLite consensus disorder prediction 47 71 - -
Arst6g00842 108 Gene3D - 9 71 IPR013088 GO:0006355|GO:0008270
Arst6g00842 108 Pfam GATA zinc finger 13 47 IPR000679 GO:0006355|GO:0043565
Arst6g00842 108 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 10 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00842 Arst-Chr6 7643393 7644443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00842 7 107 C2C2-Gata Transcription Factor Family AT3G06740 41.818 1.22e-21 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Arst6g00842 GATA 3.8e-18 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00842 - - adu:107492392 218.009