Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00836 ATGGGAAGGGCTCCCTGTTGTGACAAAGTGGGACTCAAGAAAGGCCGCTGGACAAAAGAGGAGGATCAAATCTTGACCGACTACATTCAAGCCAATGGAGAAGGTTCTTGGAGGGCTTTGCCTAAGAATGCTGGGTTACTAAGATGTGGCAAGAGTTGCAGATTGAGATGGATCAACTATTTAAGAGCTGATCTCAAAAGAGGAAACATCTCTATTGAAGAGGAAGCCATCATAACTAAGTTGCATGCTTCTTTTGGCAACAGGTGGTCACTGATAGCAAGTCATTTACCAGGCAGAACAGACAACGAGATCAAGAACTACTGGAACTCTCACTTGAGCAGGAAAGTTTACAGCTTGCCAGCCCCAAACGACAAAGACACAACCACTTGCGCCACCGCCACTGCCATTCCCAAGATCTTGGATACACCTCCGAAGCGTAAAGGTAGCGGCAAGACCAGCAGGTGGGCCATGAAGAAGAACAAAAGCACCTATTCGCCCCCAATCCAAACCCAGACGCCTTCATCGGAGGAGGAGGGAAGAGGAGAAGTAAGTGAAAAAATGATGGAGTGTGAGGAGGGGAGCATTGATGATGGTGGGGTGTTGAGTTTTAATGACATAATGGAGTCAAGTTGCATGCAGCAGCTGGATGATGATCATCAACCATGTGGCCTTTCCACCGTTACTACTGCTGGGGTCCCAAATGATGACACGTGTCCCAACACTACTACTACTACAACAACAACAGGGGAGGCATCGCATTCTAACTGCTCTTCCAATAATTCCATGGCTTCTGGGTTAGAGTTAGATGATAGCTATTGGGAGAGCGTGTTGGAGTTGAATAATAATAGCACCGATGAGTCCTCCTGGGAGCACAGTACTGAAGCCTTGTTCAATTGGCTGTGGGAAGATCATCACTTGGACAAGCTTGGAGGACAACATCATGATGATGATGATCACAAACAAAATAATGCCATGATGGTTGATTGGTTTCTCTCCTGA 999 0.4675 MGRAPCCDKVGLKKGRWTKEEDQILTDYIQANGEGSWRALPKNAGLLRCGKSCRLRWINYLRADLKRGNISIEEEAIITKLHASFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKVYSLPAPNDKDTTTCATATAIPKILDTPPKRKGSGKTSRWAMKKNKSTYSPPIQTQTPSSEEEGRGEVSEKMMECEEGSIDDGGVLSFNDIMESSCMQQLDDDHQPCGLSTVTTAGVPNDDTCPNTTTTTTTTGEASHSNCSSNNSMASGLELDDSYWESVLELNNNSTDESSWEHSTEALFNWLWEDHHLDKLGGQHHDDDDHKQNNAMMVDWFLS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00836 332 MobiDBLite consensus disorder prediction 155 177 - -
Arst6g00836 332 MobiDBLite consensus disorder prediction 237 260 - -
Arst6g00836 332 FunFam Myb transcription factor 11 90 - -
Arst6g00836 332 CDD SANT 16 61 IPR001005 -
Arst6g00836 332 Gene3D - 71 116 - -
Arst6g00836 332 MobiDBLite consensus disorder prediction 140 183 - -
Arst6g00836 332 CDD SANT 73 112 IPR001005 -
Arst6g00836 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst6g00836 332 SMART sant 13 63 IPR001005 -
Arst6g00836 332 SMART sant 66 114 IPR001005 -
Arst6g00836 332 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 236 - -
Arst6g00836 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst6g00836 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst6g00836 332 Gene3D - 11 67 - -
Arst6g00836 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst6g00836 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst6g00836 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst6g00836 332 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00836 Arst-Chr6 7550706 7553799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00836 1 176 MYB Transcription Factor Family AT5G49330 59.474 6.78e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst6g00836 Myb_DNA-binding 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00836 K09422 - gmx:100793350 286.189