Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00829 ATGGAAGAGGTTGTGATCATAATCAACGACTCGAAATTAATATCTCCGGTTGTTCCTCGCTGTAGAATATGTCACGAAGAAGAGTTTGAGAGCTCAACAACCTTGGAAGCACCATGTGCTTGTTCTGGAACTGTTAAGTTTGCTCATAGAGATTGCATACAGAGATGGTGCAACGAGAAAGGAAATACGATATGTGAATTATGTCTTCAGCAATATCAACCTGGATATACAGCAAAGCCTAAGAAGTCTCACATAAATGATGAAGCAATGTCCACTAGGATGGAGGAAGAAGAATCAAACGGAAGAATAGAGATAATGGATGAAGTGGAAGAGCAGCCAGAATGCAATGCTGCAACTCAAAGAAGCGCGTCTTGCTGTCGAACAATTGCATTAGCTTTTACATTTGTGTTGCTTGTAAGACATATATTCGCAGTGCTTTCAAGTGGAACGGAGGATTATCCATTTACACTTGTAACAGTTATTATACTAAAGGCTAGCGGAATAATTTTACCCATGTACATAATTATTAGAACGATCGGAGCCATTCACAACAGTGTTCAGCGACACTACGGGGATTATGAATATGCAATATCATTGTCTGCTACAAGTGACGAAAGCGAGTCAAGACGGCTTCATGCATATGCAACAAGTATATAA 657 0.3973 MEEVVIIINDSKLISPVVPRCRICHEEEFESSTTLEAPCACSGTVKFAHRDCIQRWCNEKGNTICELCLQQYQPGYTAKPKKSHINDEAMSTRMEEEESNGRIEIMDEVEEQPECNAATQRSASCCRTIALAFTFVLLVRHIFAVLSSGTEDYPFTLVTVIILKASGIILPMYIIIRTIGAIHNSVQRHYGDYEYAISLSATSDESESRRLHAYATSI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00829 218 FunFam E3 ubiquitin-protein ligase MARCH4 9 78 - -
Arst6g00829 218 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 19 189 IPR033275 -
Arst6g00829 218 ProSiteProfiles Zinc finger RING-CH-type profile. 13 75 IPR011016 GO:0008270
Arst6g00829 218 SMART ringv_2 20 69 IPR011016 GO:0008270
Arst6g00829 218 Pfam RING-variant domain 21 68 IPR011016 GO:0008270
Arst6g00829 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 80 IPR013083 -
Arst6g00829 218 Pfam Protein of unknown function (DUF3675) 74 179 IPR022143 -
Arst6g00829 218 CDD RING_CH-C4HC3_MARCH 21 68 - -
Arst6g00829 218 SUPERFAMILY RING/U-box 19 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00829 Arst-Chr6 7419375 7421904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00829 8 68 C3H Transcription Factor Family AT2G37950 35.484 1.78e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00829 - - gmx:100802379 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00829 6 7419375 7421904 Arst6g00829 6 7419375 7421904 ECH
Arst6g00829 6 7419375 7421904 Arst6g00829 6 7419375 7421904 PCT