Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00827 ATGACCAATGAAGCCGTTCTTGTCGATGCCGTTAAGGCCTTGTTCATTTTTTCTCATACTGACATACTTTATTCTACTTGTGTCATTGATACTATGTTCATATGTATTGTTCACACGCTTGGATCAGAAATTGAGGCATTGACAACACTCATACAACCCATGAATTATTCCTCCAAGAATTTAGCAAGATTTATAAATTCAGTTCTCCATGCTACCAACATCTCATTCTCTGACATTAAAACCAAGGTTGCTCCATTATTATTTGAATCATTTGAGACGGTTCCTCAATTAGCCCAAATCTCATACATAGGAATGGAAGGCTACTTTTTTTCATTCTACAATGGTGATCATGGTCAACCTCTCGCAATATACTCAAATCGTTCAACATCTTCTTCCATTATTTCTAAGCATTATTATGTTCAGCCGGTGAATCCTGACAATGGAAAATTATATGGGAATGCAACAATATTTGATTCCTATGTTAATACAACTTGGGTTGGGGAAGCATTAAATGGTTCAAATGATGGATTTGTCACATTGGAAAAAAAGCTTAGCAATGATCAAGAATTCTTGTTCATTAGTTCATCAAGAATCACAAAAACAGGTTCAGTGATCTCTCTTGGAGTTCAAGCAACAAAAATAACTGATTTTTTCTCTAGTGTTATTAGTCATCACCAAGGTGCCATGTTGTATCTAGCTACAAAAGATGGACAAGTGCTTCAAGAAGGGATCAAGAATACTCATATGATTGTTTCTAAGAACGACACGGTTTCGTTTCAATATGTGAATAATCACACTAGTTATTATCAGGGTTCAGTTACATGCAAAAATGATGGTGAAGTTGTTGCTTCTACTTTGAAGATTCAGGGTGTTGAGTATTTAATGCGCTGCTCCTCAATTCAGATAATGGGAATCAAATTGGTGTATGTTGTGGGAGTGCCGAAAAATGGAGCAATGATCAGTTTCATAAAGGAATTTAAGAGATATGGGTTGATGGTACTGAGTGCCATGGTGATTATGTCCTTAATTGGCACGATTAGCATTGTAATTATGAAAAAGGCACTAAAGAAGCAAAAAGAAGCAACGGAGGAAGCTGAGAGAAAGAGTAAGAATAAGAGCATTGCTTTTGCGACAGCATGCCATGATGTTCGTGCTTCCCTCGCAGCCTTGACTGGTTTGATAGAGTTGTCATCTTCGCAACTCGTCCCTTCTTCATCAGAACTAAACTCCAATCTCAAACAAATGGACTCTTATACCAAAGATTTACTAGGAATGCTGAATTCCATATTGGATGCAAGCAAGATTGAAGCAGGGGAAATGCAACTTGAGGAAGAAGAATTTGATGTGTTCCAATTCCTAGAGGAGGTAGTTGATTCTTACCATAATGTGGCTATGAAGAAAGGAGTAGATATTGTATTGGAACCTTTCAATGACTCAGTTCACAGATATTCACACACAAAAGGTGACAGAGTTAAACTCAAGAGAGTCTTGTGCAACTTATTAGACAATGCTGTTAAATTCACTGATGAAGGACACATAGCAGTTAGGGTAAGGGCACAGAAACCTGCATTGCAAAACTCAATGTCAATGATGAGGGTTACTAACCAAAATAGACCTTGGTCATGCTTATTCATCAAAAGAAAAAATAATGAACGACGGAATGATGATGACATAGAAGCTTCTAATTCAACCCAACCAGATCCTAGTAATACCATGGATTTCATATTTGAAGTTGAAGATACTGGCAAAGGAATTCCCAAAGACAAGCATGAGTCTGTGTTTGAGAATTATGTCCAAGTCAAAGAAACTGCTATTGACCATGGTGGAACTGGCTTGGGACTTGGCAGTGTGAGATCTTTGGTTCGATTGATGCATGGAGATATAAGAATTGTGGAGAAGGATAATGGTGGAAAAGGAACATGTTTCAGGTTCAATGTGCACCTCACTGTATGTGAGAAAAGAACAGATGATATCACAAGAGAAAGTGAATCTAAACCAGTTGACAGAACTCAATCACACAGGTCAACCATTCATGCTACTAGTTCTGGTTCAAGCATGTGTTCCTTGAGTCCCAAGTTACCTATTTGCGGCCCTAGCACTTTTCGGCATGAGGGATCTCGAGTTGTTCTCTTGATTCAAGGAGAAGAGCGCCGAAGAGCAACACAAAGGTTCATAGAGAGAAAAGGGATCAAAGTTAAGGTTGTTAAGCAGTGGACTAATCTGTCTCATACCCTCAATAAGATAAAAAAGAAGGGTCTGAATAGCTTAAGTTCAGGTTCTAGTTCTAGTTCTGCAACACATGGTTCTACTAATGCCCCTTTGAGTGTTTCGATGGATGAAATTGAATCTACCCAAGGATTCATCCTGATTGTGATTGATGCAAAAGCAGGACCATTTCAAGAACTATGCAGGGTGGTCTCTGAATTCAAGAGAGGCATTTGTGTTTCTTGTAGAGTTGTTTGGTTAGAGAATCCAATTTCTCCTAATCTTGATTTCAATAGCCTAAATGAGGATGATTATGATCCCAATGACATTGTTCTTCATAAACCATTACATGGTACCTCTTTGTTCCAAGTTTTAAGTCTTCTTCCAGAGTATGGTGATGGATCAATTCAAAGAGCTGAACTAGAAAAGTGCGGCACTTCAAGGTCAAGGAGTGGGAAGGAACCACAACAATCCATTGGAGATCAATCTCATGATCAAGGAGGAACAAAAGAGTGTGAAGTTCCAAGAAGCAGTGACAAGCCCTTGAGTGGTAAGAGAATCATGGTGGTTGAAGACGATAACACGATCCGCAAGATAGCTTCTGCTTCTTTGGAACAGCTTGGTGCTTCTGTTGAGAAATGTGAGAATGGTGAACAAGCTGTGGAGCTAGTTAAAGAGGGTCTAGCTAGAGATTTTCCAAATCTTCCATATGATTACATCTTTATGGACTGCCAGATGCCAGTGATGAATGGATATGAGGCAACAAGGCTAATAAGAGAGATAGAGAAAGAGTATAATACTCACATTCCTATATTTGCATTAACTGCTAATACTCAGGAAGAGGCAAATCCATTAGAAGCTGGAATGGACCATCACTTAGTCAAACCCATTGACAAAAAGGGTTTGCTTGAAGCCATCACAAAAGTACACGATAGAGTTGCCATTAGAGAGTGA 3159 0.3875 MTNEAVLVDAVKALFIFSHTDILYSTCVIDTMFICIVHTLGSEIEALTTLIQPMNYSSKNLARFINSVLHATNISFSDIKTKVAPLLFESFETVPQLAQISYIGMEGYFFSFYNGDHGQPLAIYSNRSTSSSIISKHYYVQPVNPDNGKLYGNATIFDSYVNTTWVGEALNGSNDGFVTLEKKLSNDQEFLFISSSRITKTGSVISLGVQATKITDFFSSVISHHQGAMLYLATKDGQVLQEGIKNTHMIVSKNDTVSFQYVNNHTSYYQGSVTCKNDGEVVASTLKIQGVEYLMRCSSIQIMGIKLVYVVGVPKNGAMISFIKEFKRYGLMVLSAMVIMSLIGTISIVIMKKALKKQKEATEEAERKSKNKSIAFATACHDVRASLAALTGLIELSSSQLVPSSSELNSNLKQMDSYTKDLLGMLNSILDASKIEAGEMQLEEEEFDVFQFLEEVVDSYHNVAMKKGVDIVLEPFNDSVHRYSHTKGDRVKLKRVLCNLLDNAVKFTDEGHIAVRVRAQKPALQNSMSMMRVTNQNRPWSCLFIKRKNNERRNDDDIEASNSTQPDPSNTMDFIFEVEDTGKGIPKDKHESVFENYVQVKETAIDHGGTGLGLGSVRSLVRLMHGDIRIVEKDNGGKGTCFRFNVHLTVCEKRTDDITRESESKPVDRTQSHRSTIHATSSGSSMCSLSPKLPICGPSTFRHEGSRVVLLIQGEERRRATQRFIERKGIKVKVVKQWTNLSHTLNKIKKKGLNSLSSGSSSSSATHGSTNAPLSVSMDEIESTQGFILIVIDAKAGPFQELCRVVSEFKRGICVSCRVVWLENPISPNLDFNSLNEDDYDPNDIVLHKPLHGTSLFQVLSLLPEYGDGSIQRAELEKCGTSRSRSGKEPQQSIGDQSHDQGGTKECEVPRSSDKPLSGKRIMVVEDDNTIRKIASASLEQLGASVEKCENGEQAVELVKEGLARDFPNLPYDYIFMDCQMPVMNGYEATRLIREIEKEYNTHIPIFALTANTQEEANPLEAGMDHHLVKPIDKKGLLEAITKVHDRVAIRE 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00827 1052 MobiDBLite consensus disorder prediction 877 920 - -
Arst6g00827 1052 CDD REC_hyHK_CKI1_RcsC-like 922 1041 - -
Arst6g00827 1052 SUPERFAMILY CheY-like 916 1047 IPR011006 -
Arst6g00827 1052 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 359 439 IPR036097 GO:0000155|GO:0007165
Arst6g00827 1052 Gene3D - 349 436 - -
Arst6g00827 1052 PRINTS Bacterial sensor protein C-terminal signature 634 647 IPR004358 GO:0016310|GO:0016772
Arst6g00827 1052 PRINTS Bacterial sensor protein C-terminal signature 592 602 IPR004358 GO:0016310|GO:0016772
Arst6g00827 1052 PRINTS Bacterial sensor protein C-terminal signature 608 626 IPR004358 GO:0016310|GO:0016772
Arst6g00827 1052 PRINTS Bacterial sensor protein C-terminal signature 574 588 IPR004358 GO:0016310|GO:0016772
Arst6g00827 1052 ProSiteProfiles Response regulatory domain profile. 921 1045 IPR001789 GO:0000160
Arst6g00827 1052 Coils Coil 348 372 - -
Arst6g00827 1052 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 427 646 IPR036890 -
Arst6g00827 1052 MobiDBLite consensus disorder prediction 901 920 - -
Arst6g00827 1052 SMART HisKA_10 371 438 IPR003661 GO:0000155|GO:0007165
Arst6g00827 1052 PANTHER TWO-COMPONENT HISTIDINE KINASE 93 1043 - -
Arst6g00827 1052 MobiDBLite consensus disorder prediction 659 683 - -
Arst6g00827 1052 Gene3D - 897 1049 - -
Arst6g00827 1052 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 649 IPR003594 -
Arst6g00827 1052 SMART REC_2 920 1041 IPR001789 GO:0000160
Arst6g00827 1052 ProSiteProfiles Histidine kinase domain profile. 378 650 IPR005467 -
Arst6g00827 1052 Gene3D - 437 656 IPR036890 -
Arst6g00827 1052 Pfam Response regulator receiver domain 922 1041 IPR001789 GO:0000160
Arst6g00827 1052 SMART HKATPase_4 488 650 IPR003594 -
Arst6g00827 1052 MobiDBLite consensus disorder prediction 885 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00827 Arst-Chr6 7401549 7405754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00827 39 1034 Histidine Kinase Gene Family AT2G47430 37.201 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst6g00827 HATPase_c 2.5e-26 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00827 - - aip:107646610 1897.86