Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00826 ATGTTCAGTGGCTTTTTGGCCAGTGACTTTCTCAAGAACTTCGCTGACATCAATGGCGAATCAAAATACATGAACATCCTTCAAGATGTAGCAAACCACAAAACTCGTGCTGTCCAGATCGATCTCGACGATTTAATTAATTACAAGGATTTAGACGAGGAATTTTTGAGGCGTGTAACCGAGAATACTAGGAGGTACATTGGGATTTTTTCGGATGCCATTGACGAGATCATGCCGGAACCTACTGAGGCCTTCATAGATGATGACCATGACATATTGATGACACAGAGATCAGACGAAGTTGCAGACGGTGAAGATGGTTCAGACCCACAGCAGAGGATGCCTCCTGAAATCAAGCGCTACTATGAAGTTTATATTAAAGCATCTTCAAAGGGACGACCATATACAATTAGGGAGGTGAAGGCTTCATATATTGGTCAGATTGTAAGGATATCTGGTATAGTGACACGCTGCTCAGATGTTAAACCTTTAATGAAGGTTGCTGTATACACATGTGAAGATTGTGGTTTTGAAATTTACCAGGAAGTAACAGCTCGAGTCTTCATGCCTTTGTTTGAGTGTCCATCCACTCGCTGTAAAATAAACAACAATAAGGGGAACCTTATCCTTCAGCTAAGAGCTTCAAAGTTTTTAAAATTTCAAGAGGCAAAAATTCAAGAATTAGCTGAACATGTTCCAAAGGGCCATATTCCACGAACAATGACTGTTCATTTCAGGGGAGAGCTCACAAGAAAGGTGGCTCCTGGCGATGTGGTTGAATTATCTGGGATTTTTCTTCCTATACCTTACACTGGTTTCAGAGCAATGCGTGCTGGTCTGGTTGCTGACACTTACTTAGAGGCGATGTCTGTAACTCATTTCAAGAAAAAATATGAGGAATATGAACTTAGAGGAGACGAGGAGGAGCAGATTGCACGTTTAGCAGAAGATGGCGACATCTACAATAAGTTAGCAAGATCATTGGCTCCTGAAATTTTTGGACATGAAGATATTAAAAAAGCACTGCTTCTTCTTCTTGTTGGTGCTCCCCATCGGAAGCTGAAAGATGGAATGAAGATTAGAGGAGATTTACACATATGTTTGATGGGTGATCCTGGTGTTGCCAAGAGTCAGCTCCTTAAGCATATAATCAATGTAGCTCCAAGGGGGGTGTACACCACTGGAAGAGGTAGTAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAGAGATCCAGTGACAAATGAGATGGTTCTTGAAGGTGGAGCATTGGTGCTAGCAGATATGGGCATATGTGCCATTGATGAGTTTGACAAGATGGATGAATCAGATCGAACAGCTATACATGAAGTCATGGAACAGCAGACTGTTAGCATTGCCAAAGCTGGGATCACTACTTCACTGAATGCAAGGACTGCTGTGCTTGCTGCAGCTAATCCCGCCTGGGGAAGATATGATCTACGAAGAACTCCAGCTGAAAATATTAATCTTCCCCCTGCCCTCCTATCAAGATTTGATTTGCTGTGGTTAATCCTTGATCGAGCTGATATGGATAGTGATCTTGAAATGGCTAGGCATGTTGTCTATGTCCACCAAAATAGAGAGTCCCCTGCACTAGGATTTACTCCTCTTGATCCCTCTGTTCTTCGTGCCTATATATCTGCTGCAAGAAGATCATCTCCCAGTGTCCCAAGAGATCTGGAAGAGTATATTGCAAGTGCATACTCCAGCATTCGACAAGAAGAAGCCAAGTCTAGTACTCCCCATTCATACACAACTGTCAGAACATTGCTCAGTATTCTCCGTGTATCAGCTGCGCTTGCAAGACTCCGTTTCTCTGAAACTGTTGCTCAGAGTGACGTGGACGAGGCACTGAGGTTAATGCAGATGTCAAAATTCTCTTTGTACTCCGATGAACGTCAAAGATCTGGTCTGGATGCAATATCAGATATTTATTCCATTCTACGTGATGAAGCTGCAAGGAGTGGCAAAACGGATGTCAGCTATGGTGATGCACTGAATTGGATATCTAGAAAGGTCAGTTCATAG 2046 0.4286 MFSGFLASDFLKNFADINGESKYMNILQDVANHKTRAVQIDLDDLINYKDLDEEFLRRVTENTRRYIGIFSDAIDEIMPEPTEAFIDDDHDILMTQRSDEVADGEDGSDPQQRMPPEIKRYYEVYIKASSKGRPYTIREVKASYIGQIVRISGIVTRCSDVKPLMKVAVYTCEDCGFEIYQEVTARVFMPLFECPSTRCKINNNKGNLILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSVTHFKKKYEEYELRGDEEEQIARLAEDGDIYNKLARSLAPEIFGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHQNRESPALGFTPLDPSVLRAYISAARRSSPSVPRDLEEYIASAYSSIRQEEAKSSTPHSYTTVRTLLSILRVSAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDERQRSGLDAISDIYSILRDEAARSGKTDVSYGDALNWISRKVSS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00826 681 FunFam DNA replication licensing factor MCM7 4 94 - -
Arst6g00826 681 Pfam MCM AAA-lid domain 547 630 IPR041562 -
Arst6g00826 681 Gene3D - 6 94 - -
Arst6g00826 681 Gene3D - 305 637 IPR027417 -
Arst6g00826 681 FunFam DNA replication licensing factor MCM7 305 637 - -
Arst6g00826 681 Pfam MCM P-loop domain 308 530 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 Gene3D - 164 218 - -
Arst6g00826 681 CDD MCM7 323 630 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst6g00826 681 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 10 640 IPR031327 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 ProSiteProfiles MCM family domain profile. 320 526 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 ProSitePatterns MCM family signature. 429 437 IPR018525 GO:0003677|GO:0005524|GO:0006260
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein family signature 449 462 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein family signature 500 508 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein family signature 421 435 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein family signature 361 376 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein family signature 473 485 IPR001208 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 Pfam MCM OB domain 137 267 IPR033762 -
Arst6g00826 681 Pfam MCM N-terminal domain 8 127 IPR027925 -
Arst6g00826 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 330 639 IPR027417 -
Arst6g00826 681 Gene3D - 137 265 IPR012340 -
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 279 289 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 152 163 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 114 126 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 187 199 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst6g00826 681 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 170 181 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Arst6g00826 681 FunFam DNA replication licensing factor MCM7 164 218 - -
Arst6g00826 681 SMART mcm 133 632 IPR031327 GO:0003677|GO:0005524|GO:0032508
Arst6g00826 681 SUPERFAMILY Nucleic acid-binding proteins 8 288 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00826 Arst-Chr6 7392788 7397459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00826 6 678 Core DNA Replication Machinery Family AT4G02060 85.438 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00826 K02210 - nnu:104605084 1221.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00826 6 7392788 7397459 Arst6g00826 6 7392788 7397459 ECH