Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00823 ATGGCTCCGATCCAGCGCGCGTTGAGTTCGGGATCGGAAGGTAGCGGAGATCCACCGATAGTGTTGGACGAAAGGAAGAGGAAGAGGATGCTCTCGAATCGTGAATCTGCACGCCGTTCGAGGATGAGGAAGCAAAAGCAGCTGGAGGACCTCACCGAAGAGGTGACGAAGCTGCAGTCGGCGAATAAGAACCTGGCGGAGGCCATCAAGGCGAAGGAGGAAGCCATGACGGAGACTGAGGCAGCCAACGGCGTCCTTAGGGCTCAGATGACGGAGCTTACCGACCGTCTCCGGTTCCTCAACTCGATCCTTGAGATTGCCGAGGATGTCAGTGGACTTTCCGTCGATATACCTGAGATTCCGGATCCGCTTCTGAAGCCATGGCAGATCCCTCACCCAATTCAACCAATCATGGCTTCCGCGGACATGTTCCTGCATTGA 441 0.5601 MAPIQRALSSGSEGSGDPPIVLDERKRKRMLSNRESARRSRMRKQKQLEDLTEEVTKLQSANKNLAEAIKAKEEAMTETEAANGVLRAQMTELTDRLRFLNSILEIAEDVSGLSVDIPEIPDPLLKPWQIPHPIQPIMASADMFLH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00823 146 Coils Coil 34 82 - -
Arst6g00823 146 MobiDBLite consensus disorder prediction 1 52 - -
Arst6g00823 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Arst6g00823 146 CDD bZIP_plant_GBF1 26 75 IPR045314 GO:0003700|GO:0006355
Arst6g00823 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Arst6g00823 146 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Arst6g00823 146 Pfam bZIP transcription factor 25 75 IPR004827 GO:0003700|GO:0006355
Arst6g00823 146 MobiDBLite consensus disorder prediction 19 52 - -
Arst6g00823 146 FunFam BZIP transcription factor 23 74 - -
Arst6g00823 146 Gene3D - 23 76 - -
Arst6g00823 146 SUPERFAMILY Leucine zipper domain 25 72 IPR046347 GO:0003700|GO:0006355
Arst6g00823 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00823 Arst-Chr6 7366871 7368225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00823 8 144 bZIP Transcription Factor Family AT3G62420 57.554 1.20e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst6g00823 bZIP_1 1.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00823 K25786 - gmx:778144 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00823 6 7366871 7368225 Arst6g00823 6 7366871 7368225 ECH
Arst6g00823 6 7366871 7368225 Arst9g01267 9 16267517 16268831 PCT