Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00805 ATGTCGAAGAGGAAGTTCGGATTTGACGGTTTCGGCATAAACCGCCAATCCACCTACAACTTCGAGCGATCCCAAGCTCCTCAGCGCCTCTACGTCCCTCCTTCTTCACGCCACGGCCACGACAATTACGAGGACACCGACCTCGACAACATCGATTACGACGACAACGACGCCGCCGGGAACGACAACAAAGCTGCCGGCGATGGAGGAGGTGGCAATAATGGTGGCGACGAGGAAATCGATCCGCTGGACGCCTTCATGGAAGGGATTCACGAAGAGATGAGGACGGCGGCGCCTCCTCCGAAGCCAAAGGAGAAGGCGGAGGACAGGTACAAGGACGATGAGGAGGATGATCCAATGGAGAGCTTCTTGAGGGCGAAGAAGGACCTAGGGTTGACGTTGGCCTCGGAGGCTCTGCACGCTGGCTACGATTCTGATGAAGAGGTTTATGCTGCTGCTAAGGCTGTGGATGCCGGTATGATAGAGTATGATTCTGATGATAATCCTATAGTTCTTGACAAGAAGAAGATCGAACCCATTCCTCCACTTGATCACAGTGCTATTGACTATGAGCCCTTCAATAAGGATTTCTATGAGGAGGCACCTTCAATTTCAGGTATGAGTGAGCAAGATGTCACTGAGTACCGGAAGAGTTTGGCTATTCGTGTGTCGGGATTTGATGTGCCTAAGCCAATAAAGACATTTGAGGACTGTGGGTTCTCTCAGCAAATTATGGGTGCTATAAAGAAACAAGGTTATGAGAAGCCAACGTCTATACAGTGCCAAGCTTTACCAGTTATTCTTTCCGGTAGAGATATCATTGGCATTGCAAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTGCATATCATGGATCAGCCTGAACTTCAGAAGGAAGAGGGTCCTATAGGAGTTATATGCGCACCTACAAGAGAATTGGCACATCAGATATATCTTGAGTCCAAGAAATTTGCAAAAGCATATGGTATACGTGTGTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCAGGTTGTGAGATAGTAGTTGCCACCCCTGGGAGATTGATAGACATGCTAAAAATGAAGGCCTTGACAATGACTAGAGCAACTTACCTGGTGCTTGATGAGGCTGACCGGATGTTTGATCTTGGATTTGAGCCACAAGTAAGGTCCATTGTTGGTCAGATTAGGCCGGATCGTCAGACTTTACTTTTTTCTGCGACAATGCCTCGTAAAGTTGAAAAGTTGGCTAGAGAGATCCTTAGTGATCCTGTTAGAGTAACAGTTGGGGAGGTGGGAATGGCAAATGAAGACATTACTCAAGTTGTCCATGTAATTCCTTCTGATGCTGAAAAATTGCCTTGGCTTTTGGAGAAGTTGCCCGAGATGATCGATCAAGGTGATGTCCTAGTATTTGCTTCCAAGAAGGCTACTGTGGATGAAATTGAATCACAATTGGCTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAAGATCAAGCTTCTCGCATGGAAACTTTGCAGAAGTTTAAAGCTGGTGTCTACCATGTGCTTATTGCAACTGATGTTGCTGCTCGTGGTCTTGATATCAAGTCAATTAAATCTGTGGTAAACTTTGATATTGCAAAAGATATGGATATGCATGTCCATCGGATTGGGAGAACAGGCCGTGCTGGTGACAAGGATGGGGTTGCATACACTCTTATAACTCAAAAAGAAGCACGCTTTGCTGGCGAACTGGTTAATAGCTTGATTGCTGCTGGTCAGAATGTATCCATGGAGTTGATGGATCTTGCTATGAAGGATGGGAGGTTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGGAAAAAAGGCAAAGGGAGAGGAGGAGGTGGTGGTGGTGGCGGTGGCGGCCGGGGTGTGCGTGGAGTTGATTTTGGCCTTGGTATTGGATATAATCCCGAGTCCAACAATGCTTCATCTAACACCCCTCCGAGCCGCTCTGCTGCGGTAAATTCTTTACGAACAGGAATGATGTCACAGTTTCGGAGTAGCTTTGTTGCTGCTTCCTCTAACTCCCAAAATCAAGGATACAATAACAATACAAGTATGGCTGCAAATAAGAGACCTGCACTTCGCGGTTTTGTATCTGGTGGATCAATTGGCGGGGATATAAATTCTCATAATAATGCTGCTTCACCCAGTCCTGCTACAGCAGCAGTAAACTCCGGTGGCCCAAATTCCGGTGTAAACCCTGCTCAGAACAACTCAAACAGCTCTAAACCCAGAGAAAGGAGGAGGCCATCAGGCTGGGATAGGTAG 2346 0.4676 MSKRKFGFDGFGINRQSTYNFERSQAPQRLYVPPSSRHGHDNYEDTDLDNIDYDDNDAAGNDNKAAGDGGGGNNGGDEEIDPLDAFMEGIHEEMRTAAPPPKPKEKAEDRYKDDEEDDPMESFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVLDKKKIEPIPPLDHSAIDYEPFNKDFYEEAPSISGMSEQDVTEYRKSLAIRVSGFDVPKPIKTFEDCGFSQQIMGAIKKQGYEKPTSIQCQALPVILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLESKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPEMIDQGDVLVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMETLQKFKAGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGGGGGGGGRGVRGVDFGLGIGYNPESNNASSNTPPSRSAAVNSLRTGMMSQFRSSFVAASSNSQNQGYNNNTSMAANKRPALRGFVSGGSIGGDINSHNNAASPSPATAAVNSGGPNSGVNPAQNNSNSSKPRERRRPSGWDR 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00805 781 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 233 261 IPR014014 GO:0003724
Arst6g00805 781 SMART ultradead3 252 454 IPR014001 -
Arst6g00805 781 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 385 393 IPR000629 -
Arst6g00805 781 MobiDBLite consensus disorder prediction 1 81 - -
Arst6g00805 781 MobiDBLite consensus disorder prediction 661 678 - -
Arst6g00805 781 MobiDBLite consensus disorder prediction 724 781 - -
Arst6g00805 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 442 IPR027417 -
Arst6g00805 781 Gene3D - 441 617 IPR027417 -
Arst6g00805 781 SMART helicmild6 492 573 IPR001650 -
Arst6g00805 781 MobiDBLite consensus disorder prediction 618 678 - -
Arst6g00805 781 MobiDBLite consensus disorder prediction 13 31 - -
Arst6g00805 781 CDD DEADc_DDX42 244 440 - -
Arst6g00805 781 Gene3D - 196 440 IPR027417 -
Arst6g00805 781 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 464 613 IPR001650 -
Arst6g00805 781 Pfam Helicase conserved C-terminal domain 469 573 IPR001650 -
Arst6g00805 781 MobiDBLite consensus disorder prediction 93 118 - -
Arst6g00805 781 CDD SF2_C_DEAD 451 583 - -
Arst6g00805 781 FunFam probable ATP-dependent RNA helicase DDX17 195 442 - -
Arst6g00805 781 Pfam DEAD/DEAH box helicase 257 428 IPR011545 GO:0003676|GO:0005524
Arst6g00805 781 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 197 613 - -
Arst6g00805 781 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 264 439 IPR014001 -
Arst6g00805 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 611 IPR027417 -
Arst6g00805 781 MobiDBLite consensus disorder prediction 730 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00805 Arst-Chr6 7243766 7247682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00805 233 589 Eukaryotic Initiation Factors Gene Family AT3G13920 35.000 1.09e-61 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00805 K12835 - gmx:100814854 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00805 6 7243766 7247682 Arst6g00805 6 7243766 7247682 ECH