Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00802 ATGGTGGGTGCTTGTTCACGAGGGCAAAGGAAGAAGAAGAAGCTAAGAAGGGAGAGATCTCGGCGGTGGGTTGACGGTGACAGAGAGGGCTGTGATGGTGGTGGTTTCAGTGGCAGCAGATGGTGGTGTTGGGGAGAGTGGAGAAAAAGGATGAGTGAGAGAGTGTGTGAAATTCAAATGAGGGGTAAGATGGAGAAAAAAAAAATGCAGGTTCCTAAATTCTTTTTCTTCAAGGTTTCAATGCTAATAATTGGTCTTACAAGTGTTTGTAAATGCGAGGATTGTAGGAAACCACCGAAGACGATTACTGTTAGTCAATCAGGAAATGCAAACTTCAAAACAGTTCAAAGTGCCATTGATTCTGTCCCCTCAGGAAACTCTCAATGGGTTCATATCCAAATTTCCCCAGGCGTTTACAGAGAAAAGGTGGTAATTGAGAGCGACAAACCTTGCATATATCTTAAAGGAGGCGGCGGGGGTTCCACCAGTATTGAATGGAATGACCACGGCAATGCACATTTCACTGCTACTTTCAACATTAAAGCATCGAACATTGTTGCAAACGCCATTGCCTTCAAGAACACATATAACACTGTAGACACAGGCAAGGTGGTTCAAGCAGTAGCAGCAAGGGTTCATGAAGACAAAATTGCTTTCTACGATTGTCAATTTATAGGGGTACAAGATACCCTGTTCGATTCATATGGCCGCCATTACTATAAGGGTTGTTACATTCAGGGTGGAGTTGACTTCATCTTTGGGAGTGGTCAATCAATGTTTGAGGGAAGCACGCTATTTTTCTCAATGGGACTTGGTCCCAAAGTAGATGGGGTTTTCACAGCAAACAAAAGGGAAGAAGATGACAACAGCGGCTATGTGTTCAAGAATTGCAACATAACTGGAACTGGAGGAAAAGCCATTCTTGGAAGATCTTTGAATGCTTATGGCAGAGTTATTGTTGCCAATTCTGTGCTTTCAGATGTCGTTAGACCAGAGGGTTGGGAATCTTTGCACCACAATGTATCAAAGATAACGTTTGTAGAAGAGGGAAACGCAGGACCAGGAGCAAACACATCTTATCGTGTGCCATGGACGAAACATTTAAGGGCCTCTGGCCTTCATCAATTCTTGGACATGTCTTTTATTGACAAAGAAGGCTGGATTGCTAATATTCCCTCGTTATGA 1185 0.4329 MVGACSRGQRKKKKLRRERSRRWVDGDREGCDGGGFSGSRWWCWGEWRKRMSERVCEIQMRGKMEKKKMQVPKFFFFKVSMLIIGLTSVCKCEDCRKPPKTITVSQSGNANFKTVQSAIDSVPSGNSQWVHIQISPGVYREKVVIESDKPCIYLKGGGGGSTSIEWNDHGNAHFTATFNIKASNIVANAIAFKNTYNTVDTGKVVQAVAARVHEDKIAFYDCQFIGVQDTLFDSYGRHYYKGCYIQGGVDFIFGSGQSMFEGSTLFFSMGLGPKVDGVFTANKREEDDNSGYVFKNCNITGTGGKAILGRSLNAYGRVIVANSVLSDVVRPEGWESLHHNVSKITFVEEGNAGPGANTSYRVPWTKHLRASGLHQFLDMSFIDKEGWIANIPSL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00802 394 SUPERFAMILY Pectin lyase-like 98 389 IPR011050 -
Arst6g00802 394 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 97 389 - -
Arst6g00802 394 Gene3D - 96 393 IPR012334 -
Arst6g00802 394 FunFam Pectinesterase 96 392 - -
Arst6g00802 394 Pfam Pectinesterase 102 382 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00802 Arst-Chr6 7220955 7224535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00802 74 336 Carbohydrate Esterase AT2G19150 45.353 6.00e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00802 - - adu:107492287 816.224