Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00752 ATGGAGGATTGTTGTGCCGTTTGCGCCGAGCCCTTGGAATGGGTTGCCTATGGACCTTGCATGCACCGCGATGTCTGCTCCACGTGCGTCTCTCGCCTCCGATTCATATGCCACGATCGCCGTTGCTGCATCTGCAAGACCGAATGCGACACCGTATTCGTTACCAAGGCTCTAGGAGACTATACACGGATGATTAATGATTTTTCATCCTTACCCTCCGACCCAAGGGAGGGCAAGGTTGGATCATATTGGTACCATGAGGATACAAATGCATATTTCGATGATATGGACCATTACAGGATGATCAAGGCTATGTGCAGGCTTTCCTGCAGTGTATGTGACAGGATGGAGGAGCAACCACATGATGCCTCAAAGCGCCGGCAGAGGTTTAGGAATATAGAGCAGCTGAAGGGTCACTTATTCCACCGTCATAAGTTGCTTATGTGTAGCTTATGTTTGGAGGGGAGGAAGGTATTTATATGCGAGCAAAAGCTTTATACCAGAGCACAGTTGAATCAGCATATAAGCACAGGTGATTCAGAAGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAGTTCTGTAGAACCCCATTTTATGGGGATAATGAATTATACACACACATGTCTACAGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGACAATATGAATACTATAAGAATTATGATGACCTGGAGATCCATTTCCGTAATGAGCACTTCTTATGTGAAGATGAAGCTTGCCTTGCTAAGAAGTTTATTGTGTTTCAATCTGAAGCAGAAATGAAGAGGCATAATGCTATTGAACATGGAGGGCGAATGTCACGGTCAAAGCGTAACGCTGCTCTTCAGATACCGACCAGCTTTCGGTATAAGCGTAATGATCAAGACCAACGCCGCGGAAGAGGCCGCTCCTTTCGTCGTGATTTTTCTGAAAATCAACTTTCTATGGCCATTGAAGCCAGCCTGCAGATGGCTAATGCAGCGGAAACATTTCATGATCCATCATCTTCAAGTAGTGGGCAAGTTGCAGTTGATGATGGTAATGCTGATGTTGATTCTATTATTCAGCCATTTGAATCATTAGCTACATCGGGATCTGAAGCATCTGCACGATACCTCCAAGCCTTAGGACCTAACTCGAGGAATGCAGCACTAGCAGATTCATCCTTCCCTCCACTCCCACTAGCTTCCAGCAATGACCAGCAAAGGTCCAAACAGGAGTTGGAAGGTTCATCCAGTAATACCATGGCAGCACGCTTGCGTCGGCATGGGAACAGAAATGTTTCTGTAATTAATGCTGGTAATGCTTGGCCTGCACCAGGTCGTAATTCTACCCAAGCTAGACTGCAATCAAATGCTGCTCCTGGAGTGCCACGTAATTCTAGTCAGATGAAGACCGCAAATAACAGTGGACCTTCACCCTCAACTTATGCTAGTTCTATTCAGCCTACACCCAAAACTGCCCTTGCACAATCATCTGTTGGTTCTTCGCGGGACACACGTGATAATGGAAGAATGGTTCACTCTGCATCTGCTCCAAATCTCATTGAGAGCAACCCCATTGAAGCTTCAATTTCTGAGTTCCCTCCTGTTTCTGCCTCACTAGTGAGCAAGTTATCTGCAAGCACTCAGACTCCGTTGAATGTGGAAAATGTTCAGTCTGCTAACAAGTCATTGGTTGAAAAGATTCGTGGAGCTCTTGATTTTGATGAAGATAGATACACTTTGTTTAAAGACATATCTGGTCAATATCGTCAAGGCACACTTGATACGGAGACATATCTGGACTGTGTGCAGCAGTTTGGTTTGTCTCATCTTGTACCCGAAATGGCTAATTTATTGCCTGATCCTCAGAAGAAGGAAGAGCTCATTTTGTCGTACAAAAGTAGTTTGCAAAGGAATGCTTTACCAGAAAATGGATGGGTCCATGGTGGTTCTGGCATACCCTCTAAAGGTAGTAATGCTTCCAAGAAGGGTAAAGGTAAGTCTGTAGATGGTAGTGGTAGTAACTCCACAGATAGATTAGCAGATAGCTTCTTAAGCACAGTACATCAACTACAGTCAAGCTATAAATCTTCAGAAGAGAATTTGGAGGTGCTATCAAGGGGTGATTATCGAACTAACAAGGGAAAGTCAAAAATCAATCAGCAGATTGATACCAATTCGGGAAATCAACCTTTGAGAATCAGTGGGCAGACAGAGGCATCGAGTGGAATTTTATCAAATCAGAAAAAGGAGGATGCTGGTGTTGGCAGTAAACAACGTAAAAAAACTTCCAAATTTCTTAGAGTGCGACTTGGGGATGGTTCTGCTTCAGCCCTTCTTGATTTTGATAACTCTCAGACTGAGCCAGATCCTGGAACAGACCCTTTGCCAGGTAACAAGAATGACTCCGGAGGACTGCCTGTGCGAGGTGTTTGGCGAAATGGGGGAGGCCAGAGGCTCTTCAACTGA 2487 0.4483 MEDCCAVCAEPLEWVAYGPCMHRDVCSTCVSRLRFICHDRRCCICKTECDTVFVTKALGDYTRMINDFSSLPSDPREGKVGSYWYHEDTNAYFDDMDHYRMIKAMCRLSCSVCDRMEEQPHDASKRRQRFRNIEQLKGHLFHRHKLLMCSLCLEGRKVFICEQKLYTRAQLNQHISTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRNEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYKRNDQDQRRGRGRSFRRDFSENQLSMAIEASLQMANAAETFHDPSSSSSGQVAVDDGNADVDSIIQPFESLATSGSEASARYLQALGPNSRNAALADSSFPPLPLASSNDQQRSKQELEGSSSNTMAARLRRHGNRNVSVINAGNAWPAPGRNSTQARLQSNAAPGVPRNSSQMKTANNSGPSPSTYASSIQPTPKTALAQSSVGSSRDTRDNGRMVHSASAPNLIESNPIEASISEFPPVSASLVSKLSASTQTPLNVENVQSANKSLVEKIRGALDFDEDRYTLFKDISGQYRQGTLDTETYLDCVQQFGLSHLVPEMANLLPDPQKKEELILSYKSSLQRNALPENGWVHGGSGIPSKGSNASKKGKGKSVDGSGSNSTDRLADSFLSTVHQLQSSYKSSEENLEVLSRGDYRTNKGKSKINQQIDTNSGNQPLRISGQTEASSGILSNQKKEDAGVGSKQRKKTSKFLRVRLGDGSASALLDFDNSQTEPDPGTDPLPGNKNDSGGLPVRGVWRNGGGQRLFN 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00752 828 CDD RING-HC_ZNF598 3 54 IPR041888 -
Arst6g00752 828 MobiDBLite consensus disorder prediction 649 682 - -
Arst6g00752 828 SMART c2h2final6 251 280 IPR013087 -
Arst6g00752 828 SMART c2h2final6 196 219 IPR013087 -
Arst6g00752 828 SMART c2h2final6 220 250 IPR013087 -
Arst6g00752 828 SMART c2h2final6 108 144 IPR013087 -
Arst6g00752 828 MobiDBLite consensus disorder prediction 442 517 - -
Arst6g00752 828 MobiDBLite consensus disorder prediction 394 425 - -
Arst6g00752 828 MobiDBLite consensus disorder prediction 721 754 - -
Arst6g00752 828 MobiDBLite consensus disorder prediction 442 511 - -
Arst6g00752 828 MobiDBLite consensus disorder prediction 712 828 - -
Arst6g00752 828 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Arst6g00752 828 PANTHER ZINC FINGER PROTEIN 598 1 736 IPR044288 GO:0061630|GO:0072344
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00752 1 823 C2H2 Transcription Factor Family AT3G62240 53.209 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00752 K22381 - gmx:100799878 1246.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00752 6 6751992 6756165 Arst6g00752 6 6751992 6756165 ECH