Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00746 ATGACTGCTGAGGCCACCACCTCCAAAGGCACCGTGCTGGCTCGGTCGCTCAAGGAGGCTGAAATGCAGTATTCGTCGGCCAAGGTATCAGTGTGGTGGGACATAGAGAACTGCCCTGTGTCTCGTGGCTGCGACGCGCATTCGATCGCAAAGAACATCAGCTCCGCACTGGTTCGCATGAACTACTGCGGCCCCGTCTCCATCTCAGCGTACGGCGACACCAAACGCATTCCATCGTCCGTGCAGCACGCGCTCTCCAGCACCGGCATCTCCCTCAACCACGTTCCCGCAGGTGTGAAAGATGCAAGTGACAAGAAGATTTTAGTTGATATGTTATTCTGGGCGGTGGACAACCCTGCTCCTGCGAATTATTTGCTTATTTCCGGAGATAGGGACTTCTCGAATGCCCTGCATCAGCTGCGCATGAGAAGGTACAACATTCTTCTCGCTCAACCACTAAAAGCTTCGGTGTCCCTCACTGCTGCTGCTAGGAGTGTGTGGCTCTGGACTAGCCTTTCTGCCGGTGGGCCACCACTATCCAGTGGCAGCTCGTCAAACATTGCAAGTAATACCCAAAGCTTTAGTTCTGAAACGGTTCAAAACCGTGTTTCTGAACCATCTCAACCAAGATTCAAAGAAAAATACACCAACTGCGATGCAAGCCAATTTCCAGAGAGTAAGACTAAGAACAATCATTGCTCTAATCCGGAACTTCCACAGGCAAAGTTGTTTCCCAGGGCTCCCCATGAATTCTTTTGTAATAAGCCCAACATCGCAACTATTAGTTCTGCACTTAGTCTTCCAAGCCACCAAGATCACTCAAAAAGCAGTGGTAGTAACTCTAGTGGTGGAATTCCTCATGATTCACAGAATAGCTTTTTGAGGCAAAACAACCTCCATGATCATCAGGAATCTAGACAAGATTATAGAATAAGTACTAGTCAGTCGCCTAATGTTGTCAGCTTAACTACATCAACAGAGCATAATCCACATGCCAGTCAAGCATCGTGTTATGAGAATGTGGACAAGGGGTCTTCTCGTAATTGTGAACAGTCTAACACTTCTTTGTCCAGCTTCATCCCTAATACCAGTTCTAGCGATATCTGGGGAGCTAAATTTCTACGACCACCTTCTGAGTACGACCAACATCTTATAGGCTGCATTCTGTTAACTTTAGACACCCTGAAGACTGAAAAGGTTATGCCTACTCACGGAAATATTTCTGATTGCATTCGATATGGAGATGTGAGATATCAGACAATCGATGCCAGGAAGGCTTTAGATTGTGCAATAGAGCACGGAATGGTAGTAAAACAAAGCATAGGTTCATTGAATTTTTATGTTAACAAAAATGGGAAACTCTGGAAGTGTGTGAACCCAATAGGTGGTTATCCTAATGATTTCTCAGACGCAACATGGGCTAGAATACAGCAATTCCTTTCTTCACCAACTGGAAAATCGTCAATTTTGGCATCCCGTTGCAGATATGAAGCATCGCTTATTCTTAGGAGATCATGCATGGAGAAGGAGGTTTTAGGTGATGTACTTAAGATTCTGGAGATGATAATCTCGGTCAAGAAGTGGATTATACATAACCATTCCGGGGAGTGGCAGCCGATTACTATTACACTTGAGCAGAGTTGA 1644 0.4574 MTAEATTSKGTVLARSLKEAEMQYSSAKVSVWWDIENCPVSRGCDAHSIAKNISSALVRMNYCGPVSISAYGDTKRIPSSVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPLKASVSLTAAARSVWLWTSLSAGGPPLSSGSSSNIASNTQSFSSETVQNRVSEPSQPRFKEKYTNCDASQFPESKTKNNHCSNPELPQAKLFPRAPHEFFCNKPNIATISSALSLPSHQDHSKSSGSNSSGGIPHDSQNSFLRQNNLHDHQESRQDYRISTSQSPNVVSLTTSTEHNPHASQASCYENVDKGSSRNCEQSNTSLSSFIPNTSSSDIWGAKFLRPPSEYDQHLIGCILLTLDTLKTEKVMPTHGNISDCIRYGDVRYQTIDARKALDCAIEHGMVVKQSIGSLNFYVNKNGKLWKCVNPIGGYPNDFSDATWARIQQFLSSPTGKSSILASRCRYEASLILRRSCMEKEVLGDVLKILEMIISVKKWIIHNHSGEWQPITITLEQS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00746 547 MobiDBLite consensus disorder prediction 309 334 - -
Arst6g00746 547 CDD PIN_limkain_b1_N_like 28 152 - -
Arst6g00746 547 Pfam NYN domain 28 163 IPR021139 GO:0004540
Arst6g00746 547 MobiDBLite consensus disorder prediction 267 298 - -
Arst6g00746 547 PANTHER LIMKAIN B LKAP 22 422 IPR024768 GO:0005777|GO:0010468
Arst6g00746 547 Gene3D - 20 171 - -
Arst6g00746 547 MobiDBLite consensus disorder prediction 178 234 - -
Arst6g00746 547 MobiDBLite consensus disorder prediction 267 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00746 Arst-Chr6 6660944 6663521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00746 20 190 C2H2 Transcription Factor Family AT5G61190 76.023 2.18e-83 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00746 6 6660944 6663521 Arst6g00746 6 6660944 6663521 ECH