Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00727 ATGGATAACCCACACCCCCGTGAATTGACTTTCTTACCCTCTAGGGACGTCAAAGAAGTGGATTTCTTCTCATCATCATCATCAACTGCTGCCGATCAAGATCATACTACTCATCATCATGCTTCATCCTTCCCTCATCACCCTACTGGGCTGAACTTAACGTGTGAAACTACTGGAATTTCAACTTCAAAGGGATCACCTAATGCCGATAATACTGAATCCGAGAGGAAAATGGTGGAAGGTGAATTACGGAGACTGCAAGAAGAGAATCGAAAGCTGAGAAGTATGGTGGATCAGATCGCCAAAAGCTATAGCCAACTTCAGGCACAGCTCTTCATGGCTTTGCAGAAACAAAAGCTTACTCATCATCATCAGAATACTGGTGTTAAGAGCAATGGGATGATAAGTGGAGAAAAAGCTGTGGAGGGAGATGGAAGGGCGAAAGTAGAGATGAAGAATAACGATGCTTCGGTATCCGGTGATGAAAAGAGAGAAAGAGAGGTATCAGCATCAAACAATAATGGTAATAATGCAGAGGAGGTAATGTCAAAGAAGCATGATGAGAATGATGATGATAACGAAGGTGATGAAGATGGTTTGACTAAGCTTCATTTGGGAAAACAAGTAGCAGCATCTGCTACAGAAGAAGACGTCCTTGAGCGATCTTCTTCTCAGAGTTGGGGATCATGCAAGACTCCCAACTTAGAAGAACCCAAGCTTCCTTCTTCTGACCTTCCTTTCAGGAAAGCCAGGGTTTCAGTTCGCGCAAGATCAGAAGCTCCTCTGATTAGCGATGGATGCCAGTGGAGGAAATACGGACAAAAAATGGCTAAGGGTAACCCCAGTCCTCGAGCCTACTATCGGTGCACCATGGCTGCTGGATGCCCAGTTCGGAAGCAGGTTCAAAGATGCGCAGAGGACAGTACAGTCCTAATAACAACCTATGAAGGTAACCACAACCACCCTCTTCCGCCGGCAGCCACCGCCATGGCCAACACGACTTCAGCCGCAGCAGCCATGCTACTATCAGGATCAACCTCATCATCGTCCAAAGAAACCCTAGCAACTTCAGCAGCAGGAGGATACTTCTCTTCATCAATGCCCTACACATCAATGGCGACGCTATCAGCTTCCGCGCCATTTCCCACCATCACTCTCGACCTCACACACAACCACCACAACGCACTCCAACTCCACCGTGTGGTCCCTCCTCCCGGTGTTACCTTCCCTCTCCCATTGCATGCAGTGACTCCTCCACATCAGCTTATAGCAGGGCACCCGTTCTTAATCTCTCACCACCAGAAGCTGATGCCTCCTTTGGTTCATCGACAACAACCACAGGCTTCCAATAATTCGCCGTCTATGGTGGAGACAGTGAGTGCAGCCATTGCTTTGGATCCAAACTTCACTGCGGCCGTGGCTGCGGCACTCTCATCAATCATTGGAAGCAGTAACAATGGTGGAAGTGCTATTTCTGTGTCACCGAATGGGTCACCGCAACTTCCTCAGTCATGTACTACCTACTCTACCAACTAG 1536 0.4798 MDNPHPRELTFLPSRDVKEVDFFSSSSSTAADQDHTTHHHASSFPHHPTGLNLTCETTGISTSKGSPNADNTESERKMVEGELRRLQEENRKLRSMVDQIAKSYSQLQAQLFMALQKQKLTHHHQNTGVKSNGMISGEKAVEGDGRAKVEMKNNDASVSGDEKREREVSASNNNGNNAEEVMSKKHDENDDDNEGDEDGLTKLHLGKQVAASATEEDVLERSSSQSWGSCKTPNLEEPKLPSSDLPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPSPRAYYRCTMAAGCPVRKQVQRCAEDSTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSSSKETLATSAAGGYFSSSMPYTSMATLSASAPFPTITLDLTHNHHNALQLHRVVPPPGVTFPLPLHAVTPPHQLIAGHPFLISHHQKLMPPLVHRQQPQASNNSPSMVETVSAAIALDPNFTAAVAAALSSIIGSSNNGGSAISVSPNGSPQLPQSCTTYSTN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00727 511 SUPERFAMILY WRKY DNA-binding domain 256 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g00727 511 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 64 486 IPR044810 GO:0003700
Arst6g00727 511 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g00727 511 MobiDBLite consensus disorder prediction 142 169 - -
Arst6g00727 511 MobiDBLite consensus disorder prediction 47 69 - -
Arst6g00727 511 FunFam probable WRKY transcription factor 31 248 325 - -
Arst6g00727 511 Pfam WRKY DNA -binding domain 265 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g00727 511 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g00727 511 Gene3D WRKY domain 248 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g00727 511 MobiDBLite consensus disorder prediction 142 243 - -
Arst6g00727 511 MobiDBLite consensus disorder prediction 217 232 - -
Arst6g00727 511 Coils Coil 69 103 - -
Arst6g00727 511 MobiDBLite consensus disorder prediction 28 76 - -
Arst6g00727 511 MobiDBLite consensus disorder prediction 491 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00727 Arst-Chr6 6534206 6537144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00727 72 481 WRKY Transcription Factor Family AT4G04450 39.720 1.12e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst6g00727 WRKY 7.7e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00727 6 6534206 6537144 Arst6g00727 6 6534206 6537144 ECH
Arst6g00727 6 6534206 6537144 Arst6g00727 6 6534206 6537144 PCT