Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00721 ATGTTCAACTCCAGCCGCAAAGGGATGACAAGAAGCTCCTCCTTGTTGCATGTGAATAAGGATATTGGTGAGCTGGTATGGGAAAATGGTGAAGTTAAAGTGCAAGGAAGAGGAGCAGCAGTGGAAGAAAGAGCAGCAAAGTTAGACAGATTTTACTGCTCCTCAATTTTGGATCAAAGCAAGAAGCAGATCCAACAAGGATGTTCAAACTTCAAACTCATTAGTAATACATATTCCTCCTCCTTATCAGAACAGTGCAAGAAACCAAGAATAATAGATTTTTCAGGTTCAGCACAAGCAAAAACAAAATCACACACACTACAGCACTTGGGTACTTGCAATAATAATAATAATAATAATAATAATAATAATAATCAGAGGACATCATTAGGAGGAGGAATGGTGAACTTCCCAAACTTCTTGGTTCCTTCACTCTTCCTCAACAAATCTTCTTCTTCTGCTGCTGCTGCCACTAGTAGTAAAGGTCATGATCATTCATCTGTGGTGATTGATTCTTCTAATAATAACAAAGCAGCAACACAAGAACTCAAAGAAACACCTTTTCATCAGGTACAACCACTTGATCAACACTCTCATGGTCAAAAACTATATCACGGAGCCTCATCAAGTTCAGCATCACCACCACCACCTAATAATAATATTGAGCAACACTTGGTAGTAGCATCTTCTCCTGTAAGCTCTATTGGAGCCTCAAACGACCCTGACATTGGTATTATGAGGAAGCAGCATGAGGAATACAGCAACATCACTGATCATGATCATGATCATGATGACACCACAACATATATAAGTGATGATGTAAGTGAAGAAGCTGGAACAACCACCCTGTGGCCTATAGTATCTATAATACATTATTATCTATTCATGCAGGATGATGAAGAAACAGAAGATGTAATAATAGCAAAGGAAACACCAGCTGCAGGTACCAGAGCCAAGAGAAGCAGGGACCCAGAGGTTCATAATTTATCTGAAAGGGTCAACAAGAGGATTCATACATTGAAAGAACTCATACCCAATTGCAATAAGATTGATAAAGCTTCAACTCTTGATGATGCAATTGACTATCTTAAGACCCTGAAGCTTCAGTTGCAGATAATGTCAATGGGGAGAGGACTTTGCATGCCATTGATGATGTTACATAATCATCATAATCAGTTAATGTGTTATAGGCCATCATCAGGCACAGGCATTCCCCATCAAAACATGTTTGATGGTTTCTTCAACCAAATGAGGCCTATGATTATACCACCATCACCACCTTTCATCAATCCGACTCCACCACTTGCGCCATTGTCAATCGCCAATTCTTCCAGTCGTGATGTCTCACATGTTCAAGCAATCAATAATGGTGATCAGGTTTCCCTTCACCAACACACAACTAGCAGCAGCTACCCCTTCTATTTTCCCACAATCATCAATCAGGAGGAAAAGAATAATTATGGAATGGAATAG 1473 0.3958 MFNSSRKGMTRSSSLLHVNKDIGELVWENGEVKVQGRGAAVEERAAKLDRFYCSSILDQSKKQIQQGCSNFKLISNTYSSSLSEQCKKPRIIDFSGSAQAKTKSHTLQHLGTCNNNNNNNNNNNNQRTSLGGGMVNFPNFLVPSLFLNKSSSSAAAATSSKGHDHSSVVIDSSNNNKAATQELKETPFHQVQPLDQHSHGQKLYHGASSSSASPPPPNNNIEQHLVVASSPVSSIGASNDPDIGIMRKQHEEYSNITDHDHDHDDTTTYISDDVSEEAGTTTLWPIVSIIHYYLFMQDDEETEDVIIAKETPAAGTRAKRSRDPEVHNLSERVNKRIHTLKELIPNCNKIDKASTLDDAIDYLKTLKLQLQIMSMGRGLCMPLMMLHNHHNQLMCYRPSSGTGIPHQNMFDGFFNQMRPMIIPPSPPFINPTPPLAPLSIANSSSRDVSHVQAINNGDQVSLHQHTTSSSYPFYFPTIINQEEKNNYGME 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00721 490 PANTHER TRANSCRIPTION FACTOR PIF3 47 437 IPR044273 GO:0003700|GO:0006355
Arst6g00721 490 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Arst6g00721 490 MobiDBLite consensus disorder prediction 192 222 - -
Arst6g00721 490 Pfam Helix-loop-helix DNA-binding domain 331 366 IPR011598 GO:0046983
Arst6g00721 490 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 322 377 IPR036638 GO:0046983
Arst6g00721 490 Gene3D - 314 367 IPR036638 GO:0046983
Arst6g00721 490 SMART finulus 328 372 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00721 Arst-Chr6 6474629 6476807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00721 299 386 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 50.538 4.55e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst6g00721 HLH 3.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00721 K12126 - gmx:100804665 170.629