Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00710 ATGGCCTCTTCATTTTCAATGCAGTTGATCCATACCCACAACCGTCTTCCATGGTTTCGCCATATCCAGGGTAATTATAGCCAAGATGTGGCTAAGGTTCTTAGGCCTAGTATGGTAGGTAGCAGTAGCGGATTACAGCTTGGTCATAGCAAAGGATTGGCATCAAGATCACATTATGCCCTAAGGTTTTCTGTTTTGCAACAATCCGATCCAAAATCGATCAGATATAGGACCATGGTCTGTGTCAATGCTACAGAAAACAATGTTGTAGAGCTGCAAGCCAAAGTGACAAACAAGTGCTACTTTGATGTAGAAGTTGGGGGTGAACCTGTCGGCAGGATTGTTTTGGGCCTATTTGGAGAGATCGCTCCTAAAACAGTTGAGAACTTCCGTGCTTTGTGCACAGGAGAGAAAGGATATGGCTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGATTCAAGGAGGGGATTTTACTGAAGGAGATGGAACTGGTGGAATTAGCATCTATGGTCCCAGTTTTAAAGATGAGAGTTTTGCCTTGAAGCATGTTGGTCCTGGGGTTTTGAGCATGGCAAATGCTGGTCCTAACACCAATAGTAGTCAATTTTTTATCTGCACGGTAAAGACTCCTTGGCTAGACAATCGTCACGTGGTGTTTGGACACGTCATTGATGGAATGGATGTTGTGAAGACACTTGAATCCCAAGAGACAAGCAGAATGGATATCCCTCGGAAGCCTTGCAGAATTGTTAACTGCGGTGAGCTTCCTTTAGATAGTTGA 792 0.4369 MASSFSMQLIHTHNRLPWFRHIQGNYSQDVAKVLRPSMVGSSSGLQLGHSKGLASRSHYALRFSVLQQSDPKSIRYRTMVCVNATENNVVELQAKVTNKCYFDVEVGGEPVGRIVLGLFGEIAPKTVENFRALCTGEKGYGYKGCSFHRIIKEFMIQGGDFTEGDGTGGISIYGPSFKDESFALKHVGPGVLSMANAGPNTNSSQFFICTVKTPWLDNRHVVFGHVIDGMDVVKTLESQETSRMDIPRKPCRIVNCGELPLDS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00710 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 217 IPR002130 GO:0000413|GO:0003755
Arst6g00710 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 218 233 IPR002130 GO:0000413|GO:0003755
Arst6g00710 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Arst6g00710 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Arst6g00710 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Arst6g00710 263 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 102 257 IPR002130 GO:0000413|GO:0003755
Arst6g00710 263 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 99 259 - -
Arst6g00710 263 FunFam Peptidyl-prolyl cis-trans isomerase 85 263 - -
Arst6g00710 263 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 142 159 IPR020892 GO:0003755|GO:0006457
Arst6g00710 263 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 101 258 IPR002130 GO:0000413|GO:0003755
Arst6g00710 263 Gene3D - 84 262 IPR029000 -
Arst6g00710 263 SUPERFAMILY Cyclophilin-like 94 259 IPR029000 -
Arst6g00710 263 CDD cyclophilin_ABH_like 99 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00710 Arst-Chr6 6351538 6383987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00710 49 256 U-box Gene Family AT5G67530 37.799 4.52e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00710 K03768 - gmx:100785805 410.609