Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00646 ATGGGGATCGATATTAAGGCTGGCGGCAAGAGCAAAAAGAGCAAAAGGACCGCACCCAAGTCCAATGATATCTACCTCAAGCTCCTCGTCAAGCTTTACCGCTTCCTTGTGAGGAGGACCGGCAGCAATTTCAATGCCGTGATACTGAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCGCTTTCTTTGTCACGCTTGATTAAGTTCATGAAGGGAAAGGAAGGTAAAATTGGCGTTGTAGTGGGAGCTGTAACCGATGATATCAGAGTGTATGAAGTTCCTGCATTGAAGGTTACTGCACTCAGGTTTACAGAGACTGCACGTGCTAGAATAGAGAAGGCTGGTGGTGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCTCCTCTCGGACAGAACACGGTCCTTCTTAGAGGCCCAAAGAACTCCAGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGGAGAAACAGCAAAGGATTTAGGGTTTAA 564 0.477 MGIDIKAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIKFMKGKEGKIGVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00646 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Arst6g00646 187 Gene3D - 1 187 - -
Arst6g00646 187 FunFam 60S ribosomal protein L18 1 187 - -
Arst6g00646 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Arst6g00646 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Arst6g00646 187 MobiDBLite consensus disorder prediction 151 187 - -
Arst6g00646 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00646 Arst-Chr6 5716653 5718347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00646 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.419 6.20e-104 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00646 K02883 - tcc:18613591 345.895