Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00639 ATGGCAGGGGGAGACCCAGAGAGGAATAAAAGACTAGTCCTTATAGGAGTCTCAACCTTCTTATTGGTGGCCATGGTGGTGGCCGTCACACTCAGCGTCACCTTGAACAAGAACTCCAGCGATGGTTCAAAGGCAGAAGACCAGAGCCATGTTGCATCGTCGGTGAAAGCGGTGAAGACCCTCTGCGCCCCTACAGATTACAGAGAGGAATGCGAGCAGTCATTGTCCGCAGAAGCCGGCAACACCACGGATCCAAGAGAACTCATCAAGATCGCATTCAACATCACCATCAAGAGGATCACCGATGGCCTTGAGCAGACCCAGATGCTTCAGGAATTGGAGAACGACCCCATGGCCAAGCAGGCTCTCGACTCTTGCAAGCAACTCATGGACCTCTCCATTGACGAGTTCAACAGGTCCCTCGACAAGCTTGGAAGGTTCGACCTCAACAACATCGACAACATTCTCAGCAGCTTGAAGGTCTGGCTCAGCGGTGCCATCACCTACCAGGAGACCTGCCTTGACGGCTTCGAGAACACCACCAGCAGCGCCGGCGAGCAGATGAAGGAATTGTTGAGGACCGCCATGCACATGAGCAGCAATGGCCTCGCCATCATCACCGAGCTCGACAAGACCATGAGCGCCATGCATTTCCCCTCCACCCAGCCCGCCGGAGCCCGCCGCCTGATGTCCGAGGACGACGAGGACCAGGACCAGGATCAGGAGCTACCCGAGTGGATCGAGGACCGCATCGCCGTCCGCAAGCTTATGGCTACTGTTGGTGGCGGAAGAAGGATCAAGGCTCACGTGACAGTTGCAAAGGATGGTTCTGGTGATTTCCAGACCATCGCAGAAGCCTTGAGAAAGGTTCCTTCAAATAACAAGAAGCCCTTCATCATCCACATCAAGGAGGGTGTCTACCAGGAGTACCTTGAAGTCCCCAGGAACTTGACCCACGTTGTCTTCATCGGCGATGGTGGTCACAAGACCCGCATCACCGGCGATAAGAACTTCATCGATGGCGTTAACACTTACAAGACCGCCACCGTTGCTGTTCAAGGAGACTACTTCGTTGCCATGGGAGTAGGATTCGAGAACTCAGCCGGAGCAGCGAAGCACCAGGCAGTGGCTCTGAGGGTGCAAGCAGACAAATCCATCTTCTACAAGTGCAGAATGGACGGATACCAAGACACACTGTACGCCCACACCATGCGTCAGTTCTACAGAGACTGCGTGATCTCAGGCACCATCGATTTCGTGTTCGGAGATGCAGTGTCAGTCTTCCAGAACTGCACCTTCGAGGTGAGGAAGCCATTGGCAAACCAACAGTGCATTGTGACAGCACAAGGCAGGAAGGAGAGGTACCAGCCAACAGGAATTGTGATCCAGGGTGGTTCCATCGTGTCCGACCCAGAATACTTCCCAGTTAGGTTCACCAACAAGGCCTTCCTTGCTCGTCCATGGAAGAATTACTCAAGGACCGTCTTCTTGGATACCTACCTTGATGACTTGGTCACCCCCGCCGGTTACATGCCATGGCAAACCGCCGAGGGACTCTCCGGCATGGACACTTGCTACTACGCTGAGTTCGGCAACCGTGGTCCCGGAGCTGACAACACCAACCGTGTCAACTGGCTTGGTATCAAGAAAAACTTCACAGCACAAGCAGCAAACATGTACAACCCAACCAACTTCTTCCGTGGAGATGAATGGATCAAGGTTACCAAGATTCCCTACAACCCTGGCCAGCCCGCTCCCGCCAGTAACAGTAATTTTGCCGCCGCCTTGTTGCGCCGAGTTGCAGCTGCCCCTAGAAGCAGCCCTTCCTCCTCTTCCCCTGCTCCTGCTTCTTCTCCGACCGGGGCCGCCACCACCACTGCCACCTCCTCCCCTGCTCCTTCCCCTGCTAATCTCTAA 1917 0.5477 MAGGDPERNKRLVLIGVSTFLLVAMVVAVTLSVTLNKNSSDGSKAEDQSHVASSVKAVKTLCAPTDYREECEQSLSAEAGNTTDPRELIKIAFNITIKRITDGLEQTQMLQELENDPMAKQALDSCKQLMDLSIDEFNRSLDKLGRFDLNNIDNILSSLKVWLSGAITYQETCLDGFENTTSSAGEQMKELLRTAMHMSSNGLAIITELDKTMSAMHFPSTQPAGARRLMSEDDEDQDQDQELPEWIEDRIAVRKLMATVGGGRRIKAHVTVAKDGSGDFQTIAEALRKVPSNNKKPFIIHIKEGVYQEYLEVPRNLTHVVFIGDGGHKTRITGDKNFIDGVNTYKTATVAVQGDYFVAMGVGFENSAGAAKHQAVALRVQADKSIFYKCRMDGYQDTLYAHTMRQFYRDCVISGTIDFVFGDAVSVFQNCTFEVRKPLANQQCIVTAQGRKERYQPTGIVIQGGSIVSDPEYFPVRFTNKAFLARPWKNYSRTVFLDTYLDDLVTPAGYMPWQTAEGLSGMDTCYYAEFGNRGPGADNTNRVNWLGIKKNFTAQAANMYNPTNFFRGDEWIKVTKIPYNPGQPAPASNSNFAAALLRRVAAAPRSSPSSSSPAPASSPTGAATTTATSSPAPSPANL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00639 638 PANTHER PECTINESTERASE 21 575 - -
Arst6g00639 638 SUPERFAMILY Pectin lyase-like 266 581 IPR011050 -
Arst6g00639 638 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 209 IPR035513 -
Arst6g00639 638 CDD PMEI-like_3 60 211 - -
Arst6g00639 638 MobiDBLite consensus disorder prediction 604 638 - -
Arst6g00639 638 FunFam Pectinesterase 263 583 - -
Arst6g00639 638 ProSitePatterns Pectinesterase signature 1. 294 313 IPR018040 -
Arst6g00639 638 Gene3D - 263 583 IPR012334 -
Arst6g00639 638 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 211 IPR035513 -
Arst6g00639 638 ProSitePatterns Pectinesterase signature 2. 413 422 IPR033131 -
Arst6g00639 638 Pfam Pectinesterase 269 569 IPR000070 GO:0030599|GO:0042545
Arst6g00639 638 SMART PMEI_2 53 205 IPR006501 GO:0004857
Arst6g00639 638 MobiDBLite consensus disorder prediction 603 638 - -
Arst6g00639 638 FunFam Pectinesterase 54 210 - -
Arst6g00639 638 NCBIfam pectinesterase inhibitor domain 24 209 IPR006501 GO:0004857
Arst6g00639 638 MobiDBLite consensus disorder prediction 221 241 - -
Arst6g00639 638 Pfam Plant invertase/pectin methylesterase inhibitor 57 205 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00639 Arst-Chr6 5635086 5638276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00639 5 635 Carbohydrate Esterase AT3G05610 46.614 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00639 K01051 - gmx:100801686 819.305