Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00638 ATGGCAGCTTCAGATCTATCTATAAGCTTATTATTATTCACTGCCGCTATTATTTTCTCCAACTTGGCTTCTCTTGCATCTTCATCTTCCTCCATTTGCGACCTCACACCATATCCACCCTTCTGCAAATCCAATTCACCTTCCAAAGGCCGCAGTGACATACATAGCTATGGTCGATTTTTCGCACGCAAATCCCTCTTATCATCTACTAAGTTTCGCTCATTAGTATCTAAGTATCTCAAACCTCGTTCCAAAAACAAATTATCTAGGTCCATGCTTCTTGCTCTTCAAGATTGCTACCTTCTAAGTGACTTCAACGTAGATTTCTGGACCAACACTCTCAACGCCATAAATTCCACTAACACACTCAGTAGCTCAGAGGATGAAAATTATTTGCATAGCATGATTAGTGCTACTTTAACCAACCACGACACATGCTTAGATAGCCTCCAACAAGCCACAACCACACACACTGATGAATTACTCATCAGCAATATCTCCAATGGGACCAAGTTTTATAGCATATCCCTTGCATTTTTCAAGCAAGGTTGGGGAACCAACAAAAACACACACAACAGAAAATTAACAGAGAGGATAGTAAAGAGAAGTAACATTCATCGCATGTGGGAACAGAGGCTGTATGAGATAACAAAAAGAAGAGGAAGAAAACTGCTTCAGTTAGATCCTGAGGCGAATGTTGTTGTGAGCCAAATGGTGGTGGTGAACCCAGATGGCTCTGGAGACTACACAACTATTAATGATGCAGTGAATGCAGCACCAAACAACACCCTTGGTATCAATGGCTTTTTTGTAATTTATGTGGTTGCAGGGGTGTATGAAGAGTACGTTTCCATTCCAAAGACCAAGCAGTATTTGATGATGATAGGTGATGGTATTAACCGGACTATAATCACCGGAAATCGAAGCGTCACTGATGGCTGGACAACCTTCAACTCTGCCACGTTTGCTGTGGTTGCAAAAGGCTTTGTGGCGGTGAACATGACATTTCGGAACACAGCCGGAGGAATAAACCACCAAGCAGTGGCGCTTCGGAGCGGTGCAGATCTGTCTGCATTTTATAGCTGTAGCTTTGAAGGGTACCAAGACACATTGTACACGCATTCTATGAGGCAATTCTACAGAAACTGCGACATTTATGGCACTGTGGACTTCATATTTGGCAATGCAGCGGTTGTCTTCCAAGATTGTAACATCTACCCAAGACTACCAATGAGTAATCAATTCAATGCAATCACTGCACAGGGCAGAACTGATGTGAATCAAAACACCGGAATCTCCATACACAATTGCACCATAACGGCCGCAGCCGATTTAGCTGCTAGTAACGGCACCACAAAAACGTACCTAGGGAGGCCATGGAAACTGTATTCAAGAACAGTTTACATGCAATCTTTCATGGATAGCTTGATCGATCCAGCGGGTTGGGTTGCTTGGTCTGGGGACTTTGCCTTAGACACCCTTTATTATGCTGAATATGATAACTGGGGAGCCGGATCAAATACCAGTAGTAGGGTTACTTGGGCAGGTTACGATGTGCTTTTGAACAGCATAGGTGCAATTAATTTTACAGTCTCCAATTTCATATTTGGTGATGTTTGGCTTCCCGCCACTGGAGTACCATATTTAGCTAGTTTATACTGA 1662 0.429 MAASDLSISLLLFTAAIIFSNLASLASSSSSICDLTPYPPFCKSNSPSKGRSDIHSYGRFFARKSLLSSTKFRSLVSKYLKPRSKNKLSRSMLLALQDCYLLSDFNVDFWTNTLNAINSTNTLSSSEDENYLHSMISATLTNHDTCLDSLQQATTTHTDELLISNISNGTKFYSISLAFFKQGWGTNKNTHNRKLTERIVKRSNIHRMWEQRLYEITKRRGRKLLQLDPEANVVVSQMVVVNPDGSGDYTTINDAVNAAPNNTLGINGFFVIYVVAGVYEEYVSIPKTKQYLMMIGDGINRTIITGNRSVTDGWTTFNSATFAVVAKGFVAVNMTFRNTAGGINHQAVALRSGADLSAFYSCSFEGYQDTLYTHSMRQFYRNCDIYGTVDFIFGNAAVVFQDCNIYPRLPMSNQFNAITAQGRTDVNQNTGISIHNCTITAAADLAASNGTTKTYLGRPWKLYSRTVYMQSFMDSLIDPAGWVAWSGDFALDTLYYAEYDNWGAGSNTSSRVTWAGYDVLLNSIGAINFTVSNFIFGDVWLPATGVPYLASLY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00638 553 PANTHER PECTINESTERASE 17 542 - -
Arst6g00638 553 CDD PMEI-like_3 32 185 - -
Arst6g00638 553 SUPERFAMILY Pectin lyase-like 234 549 IPR011050 -
Arst6g00638 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 182 IPR035513 -
Arst6g00638 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Arst6g00638 553 SMART PMEI_2 24 179 IPR006501 GO:0004857
Arst6g00638 553 FunFam Pectinesterase 232 552 - -
Arst6g00638 553 Pfam Pectinesterase 239 538 IPR000070 GO:0030599|GO:0042545
Arst6g00638 553 Gene3D - 232 552 IPR012334 -
Arst6g00638 553 Pfam Plant invertase/pectin methylesterase inhibitor 30 178 IPR006501 GO:0004857
Arst6g00638 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00638 Arst-Chr6 5632533 5634524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00638 6 552 Carbohydrate Esterase AT4G02330 55.326 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00638 K01051 - gmx:100801141 788.104